# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2j6aA	141	1.484		
2hf1A	68	6.516		
1e1aA	314	12.98	b.68.6.1	59155
2oggA	152	16.72		
1pjxA	314	19.47	b.68.6.1	104167
2jwyA	168	22.24		
2ioyA	283	23.35		
3bqkA	360	24.74		
1l7dA	384	29.72	c.2.1.4,c.23.12.2	77774,77775
2pkhA	148	33.43		
1obfO	335	34.14	c.2.1.3,d.81.1.1	86768,86769
1k3tA	359	34.84	c.2.1.3,d.81.1.1	72022,72023
1g0u1	266	35.86		
2ooiA	162	39.75		
2d1lA	253	41.92		
1crwG	333	42.52	c.2.1.3,d.81.1.1	30026,39941
1g9zA	152	45.70	d.95.2.1	60408
8abp	306	47.04		
1rypI	222	48.62	d.153.1.4	41877
2o7tA	199	49.67		
1v54J	59	52.04	f.23.4.1	100331
2occJ	59	55.30	f.23.4.1	43524
1ypvA	313	62.37		
1auk	489	68.03		
1iruK	201	75.41	d.153.1.4	71362
1edhA	226	76.69	b.1.6.1,b.1.6.1	22198,22199
1ryp2	233	80.22		
2fa1A	160	83.32	d.190.1.2	133182
2c34A	116	85.18	b.1.26.1	129710
2jepA	395	87.86