# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2hf1A	68	1.563		
2jwyA	168	4.422		
2j6aA	141	8.211		
3bqkA	360	9.319		
1g9zA	152	19.21	d.95.2.1	60408
1l7dA	384	20.64	c.2.1.4,c.23.12.2	77774,77775
2jepA	395	27.35		
2c3bA	172	29.33	b.62.1.1	129723
1w9yA	319	32.30	b.82.2.1	120801
2retB	175	33.71		
2oggA	152	39.05		
2cyaA	364	44.11		
1x82A	190	45.67	b.82.1.7	114955
2pkhA	148	47.02		
2nzhA	113	48.82		
1j1uA	306	53.88	c.26.1.1	83980
2q4uA	272	55.92		
2d1lA	253	56.19		
1e2tA	284	59.16	d.3.1.5	37121
1vicA	262	60.21	c.68.1.13	100756
174lA	164	62.26	d.2.1.3	36956
1v6tA	255	65.09	c.6.2.5	113550
1sqwA	188	66.30	b.122.1.1,d.17.6.3	119033,119034
2ooiA	162	67.11		
1a7qH	116	71.64	b.1.1.1	19955
1i8kB	124	72.97	b.1.1.1	71131
1khiA	176	73.35	b.34.5.2,b.40.4.5	77408,77409
1xw8A	252	74.86	c.6.2.5	116111
2q2iA	116	74.97		
1a7oH	116	75.26	b.1.1.1	19943
1j05B	121	83.21	b.1.1.1	90736
1mqkH	127	85.32	b.1.1.1	85053
1z1aA	142	86.58	d.339.1.1	124344
2ila	155	88.48