# List of top-scoring protein chains for t06-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2j6aA	141	1.890		
2hf1A	68	4.536		
1tjyA	316	9.395	c.93.1.1	107062
2fvyA	309	10.84	c.93.1.1	134227
2fn9A	290	11.42		
1gca	309	18.65		
1l4dB	122	26.28	d.15.5.1	77684
2qu7A	288	27.18		
2h3hA	313	29.90		
2hqbA	296	31.05		
1ne9A	335	31.36	d.108.1.4,d.108.1.4	91839,91840
2c34A	116	37.92	b.1.26.1	129710
2ek5A	129	39.91		
1h8mA	140	42.16	d.110.4.1	60782
2gfgA	193	44.49		
3d02A	303	51.17		
2qvcA	313	51.66		
2i7qA	402	52.53		
3by6A	126	54.57		
1knqA	175	61.38	c.37.1.17	72786
2dri	271	63.44		
1rh6A	55	64.82	a.6.1.7	104935
1ryp1	222	64.98		
2bdtA	189	68.87	c.37.1.25	128344
2rjoA	332	69.54		
1suwA	249	76.33	e.52.1.1	106027
2ioyA	283	78.26		
1o12A	376	78.62	b.92.1.5,c.1.9.10	80758,80759
1e6cA	173	79.80	c.37.1.2	59296
2fqxA	318	80.82		
1ryp2	233	81.28		
2o20A	332	81.67		
1g3kA	174	85.12	d.153.1.4	41989
2etxA	209	86.28