# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2j6aA	141	2.566		
1tjyA	316	8.574	c.93.1.1	107062
2hf1A	68	10.42		
2fn9A	290	19.10		
2fvyA	309	19.86	c.93.1.1	134227
1h8mA	140	25.40	d.110.4.1	60782
1l4dB	122	28.17	d.15.5.1	77684
2gfgA	193	31.24		
1ne9A	335	34.99	d.108.1.4,d.108.1.4	91839,91840
1gca	309	37.50		
2c34A	116	37.56	b.1.26.1	129710
1ryp1	222	40.27		
1o12A	376	44.41	b.92.1.5,c.1.9.10	80758,80759
1g0uC	243	46.06	d.153.1.4	41948
2h3hA	313	48.57		
1rypK	198	49.32	d.153.1.4	41879
2hqbA	296	49.63		
1g3kA	174	49.91	d.153.1.4	41989
1ryp2	233	50.79		
1yarA	233	55.41	d.153.1.4	122837
2qb7A	397	60.15		
1suwA	249	61.91	e.52.1.1	106027
1k7jA	206	62.23	d.115.1.1	72103
1y63A	184	63.28	c.37.1.1	116494
1knqA	175	63.33	c.37.1.17	72786
1rypD	241	65.28	d.153.1.4	41935
1v54J	59	65.82	f.23.4.1	100331
2nteA	210	67.11		
2i7qA	402	67.13		
2j9iA	421	68.02		
2ek5A	129	70.16		
1rh6A	55	71.78	a.6.1.7	104935
1yarH	217	71.83	d.153.1.4	122844
2hu9A	130	79.37		
2etxA	209	84.18		
2couA	109	85.05