Best Alignments for TR464

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2hf1A	2.5518e-01	2hf1A/TR464-2hf1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fa1A	2.0924e+01	2fa1A/TR464-2fa1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.190.1.2
2occJ	2.3950e+01	2occJ/TR464-2occJ-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.23.4.1
1v54J	2.6062e+01	1v54J/TR464-1v54J-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.23.4.1
2j6aA	2.7956e+01	2j6aA/TR464-2j6aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1suwA	3.3485e+01	1suwA/TR464-1suwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.52.1.1
1k7jA	4.3998e+01	1k7jA/TR464-1k7jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.115.1.1
2hhiA	4.8674e+01	2hhiA/TR464-2hhiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ltqA	6.2020e+01	1ltqA/TR464-1ltqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.108.1.9 c.37.1.1
1gl4A	6.2865e+01	1gl4A/TR464-1gl4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.22.1.2 g.3.11.5
1z1zA	6.9997e+01	1z1zA/TR464-1z1zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p19A	7.0917e+01	2p19A/TR464-2p19A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hjiB	7.1355e+01	1hjiB/TR464-1hjiB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2couA	7.1387e+01	2couA/TR464-2couA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gca	7.8690e+01	1gca/TR464-1gca-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gudA	7.9412e+01	1gudA/TR464-1gudA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2oggA	7.9598e+01	2oggA/TR464-2oggA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rypI	8.0942e+01	1rypI/TR464-1rypI-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.153.1.4
1z0sA	8.1083e+01	1z0sA/TR464-1z0sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.52.1.1
1rypK	8.1722e+01	1rypK/TR464-1rypK-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.153.1.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001