This file specifies which residues will be varied Column 2: Chain Column 4-7: sequential residue number Column 9-12: pdb residue number Column 14-18: id (described below) Column 21-40: amino acids to be used NATAA => use native amino acid ALLAA => all amino acids NATRO => native amino acid and rotamer PIKAA => select inividual amino acids POLAR => polar amino acids APOLA => apolar amino acids The following demo lines are in the proper format A 1 3 NATAA A 2 4 ALLAA A 3 6 NATRO A 4 7 NATAA B 5 1 PIKAA DFLM B 6 2 PIKAA HIL B 7 3 POLAR ------------------------------------------------- start A 1 18 NATAA L A 2 19 NATAA S A 3 20 NATAA L A 4 21 NATAA L A 5 22 NATAA E A 6 23 NATAA S A 7 24 NATAA K A 8 25 NATAA G A 9 26 NATAA L A 10 27 NATAA E A 11 28 NATAA A A 12 29 NATAA L A 13 30 NATAA N A 14 31 NATAA K A 15 32 NATAA A A 16 33 NATAA I A 17 34 NATAA A A 18 35 NATAA S A 19 36 NATAA G A 20 37 NATAA T A 21 38 NATAA V A 22 39 NATAA Q A 23 40 NATAA R A 24 41 NATAA A A 25 42 NATAA D A 26 43 NATAA G A 27 44 NATAA S A 28 45 NATAA I A 29 46 NATAA Q A 30 47 NATAA N A 31 48 NATAA Q A 32 49 NATAA S A 33 50 NATAA L A 34 51 NATAA H A 35 52 NATAA E A 36 53 NATAA A A 37 54 NATAA L A 38 55 NATAA I A 39 56 NATAA T A 40 57 NATAA R A 41 58 NATAA D A 42 59 NATAA R A 43 60 NATAA K A 44 61 NATAA Q A 45 62 NATAA V A 46 63 NATAA F A 47 64 NATAA R A 48 65 NATAA I A 49 66 NATAA E A 50 67 NATAA D A 51 68 NATAA S A 52 69 NATAA I A 53 70 NATRO P A 54 71 NATAA V A 55 72 NATAA L A 56 73 NATAA L A 57 74 NATRO P A 58 75 NATAA E A 59 76 NATAA E A 60 77 NATAA A A 61 78 NATAA I A 62 79 NATAA A A 63 80 NATAA T A 64 81 NATAA I A 65 82 NATAA Q A 66 83 NATAA I A 67 84 NATAA A A 68 85 NATAA N A 69 86 NATAA F