Best Alignments for TR462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2h3jA	2.6661e-11	2h3jA/TR462-2h3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcxA	3.5471e-11	2gcxA/TR462-2gcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	2.2210e-04	1fx7A/TR462-1fx7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2dtrA	3.5461e-04	2dtrA/TR462-2dtrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
1qw1A	8.2914e-04	1qw1A/TR462-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qq9A	2.1800e-03	2qq9A/TR462-2qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtr	6.0706e-01	2dtr/TR462-2dtr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cnlA	1.2085e+00	3cnlA/TR462-3cnlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pujA	1.7035e+00	1pujA/TR462-1pujA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2e87A	2.0045e+00	2e87A/TR462-2e87A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1udxA	3.9986e+00	1udxA/TR462-1udxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.117.1.1 c.37.1.8 d.242.1.1
1bymA	4.0421e+00	1bymA/TR462-1bymA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
2yv5A	5.3982e+00	2yv5A/TR462-2yv5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dbyA	6.0611e+00	2dbyA/TR462-2dbyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ni3A	6.4441e+00	1ni3A/TR462-1ni3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.15.10.2
3defA	8.8423e+00	3defA/TR462-3defA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b8wA	8.9197e+00	2b8wA/TR462-2b8wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qu8A	9.6664e+00	2qu8A/TR462-2qu8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cxxA	1.0547e+01	2cxxA/TR462-2cxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1wf3A	1.0593e+01	1wf3A/TR462-1wf3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.52.3.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001