Best Alignments for TR462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2h3jA	2.5532e-11	2h3jA/TR462-2h3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcxA	5.4681e-11	2gcxA/TR462-2gcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	2.0925e-04	1qw1A/TR462-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtrA	2.6456e-04	2dtrA/TR462-2dtrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
1fx7A	1.9189e-03	1fx7A/TR462-1fx7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2qq9A	1.2239e-02	2qq9A/TR462-2qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cnlA	3.3752e+00	3cnlA/TR462-3cnlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pujA	4.2671e+00	1pujA/TR462-1pujA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2yv5A	4.7095e+00	2yv5A/TR462-2yv5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e87A	5.4107e+00	2e87A/TR462-2e87A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ni3A	7.7474e+00	1ni3A/TR462-1ni3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.15.10.2
2b8wA	8.0875e+00	2b8wA/TR462-2b8wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dbyA	8.6914e+00	2dbyA/TR462-2dbyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhsA	9.1417e+00	1rhsA/TR462-1rhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
2hjgA	1.0206e+01	2hjgA/TR462-2hjgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhs	1.0933e+01	1rhs/TR462-1rhs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mkyA	1.4235e+01	1mkyA/TR462-1mkyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 c.37.1.8 d.52.5.1
3defA	1.6064e+01	3defA/TR462-3defA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1udxA	1.6563e+01	1udxA/TR462-1udxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.117.1.1 c.37.1.8 d.242.1.1
1j48A	1.7160e+01	1j48A/TR462-1j48A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.7.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001