Best Alignments for TR462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2gcxA	4.4606e-11	2gcxA/TR462-2gcxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h3jA	5.4518e-11	2h3jA/TR462-2h3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	3.9151e-05	1fx7A/TR462-1fx7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2dtrA	3.6792e-04	2dtrA/TR462-2dtrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2qq9A	5.9452e-04	2qq9A/TR462-2qq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	3.2196e-03	1qw1A/TR462-1qw1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtr	3.9064e-02	2dtr/TR462-2dtr-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bymA	2.5351e-01	1bymA/TR462-1bymA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
1udxA	4.8392e-01	1udxA/TR462-1udxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.117.1.1 c.37.1.8 d.242.1.1
3cnlA	6.3805e-01	3cnlA/TR462-3cnlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e87A	1.3303e+00	2e87A/TR462-2e87A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dbyA	2.2141e+00	2dbyA/TR462-2dbyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pujA	2.2715e+00	1pujA/TR462-1pujA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2cxxA	2.4739e+00	2cxxA/TR462-2cxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1lnzA	3.1298e+00	1lnzA/TR462-1lnzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qptA	3.5306e+00	2qptA/TR462-2qptA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yv5A	4.5695e+00	2yv5A/TR462-2yv5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ni3A	5.5226e+00	1ni3A/TR462-1ni3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.15.10.2
1wf3A	5.8240e+00	1wf3A/TR462-1wf3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8 d.52.3.1
2qu8A	6.0614e+00	2qu8A/TR462-2qu8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001