Best Alignments for TR462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2h3jA	1.3774e-10	2h3jA/TR462-2h3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcxA	1.8287e-10	2gcxA/TR462-2gcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	9.3616e-04	1fx7A/TR462-1fx7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
1qw1A	2.4784e-03	1qw1A/TR462-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtrA	5.3490e-03	2dtrA/TR462-2dtrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2qq9A	1.2291e-02	2qq9A/TR462-2qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtr	1.6557e+00	2dtr/TR462-2dtr-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bymA	8.7414e+00	1bymA/TR462-1bymA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
1y8xB	1.8316e+01	1y8xB/TR462-1y8xB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bi0	2.3212e+01	1bi0/TR462-1bi0-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhsA	2.4253e+01	1rhsA/TR462-1rhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1rhs	2.4724e+01	1rhs/TR462-1rhs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h75A	3.3049e+01	1h75A/TR462-1h75A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.1
1e0cA	3.5612e+01	1e0cA/TR462-1e0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1uarA	3.6417e+01	1uarA/TR462-1uarA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
2c81A	4.4993e+01	2c81A/TR462-2c81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1j48A	5.0514e+01	1j48A/TR462-1j48A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.7.1
1vekA	5.1855e+01	1vekA/TR462-1vekA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.5.2.1
1cbfA	5.5619e+01	1cbfA/TR462-1cbfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
1va0A	5.5808e+01	1va0A/TR462-1va0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001