Best Alignments for TR462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2h3jA	4.2416e-11	2h3jA/TR462-2h3jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcxA	5.2052e-11	2gcxA/TR462-2gcxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fx7A	2.9054e-04	1fx7A/TR462-1fx7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2qq9A	7.6628e-03	2qq9A/TR462-2qq9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtrA	1.1269e-02	2dtrA/TR462-2dtrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.24 a.76.1.1 b.34.1.2
2dtr	1.3062e-02	2dtr/TR462-2dtr-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bi0	2.8755e-02	1bi0/TR462-1bi0-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	3.3679e-02	1qw1A/TR462-1qw1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bymA	1.1623e+00	1bymA/TR462-1bymA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
1h9fA	1.4606e+01	1h9fA/TR462-1h9fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.140.1.1
1va0A	1.8248e+01	1va0A/TR462-1va0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
1jeiA	1.9747e+01	1jeiA/TR462-1jeiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.140.1.1
1y8xB	2.4625e+01	1y8xB/TR462-1y8xB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pjzA	3.0733e+01	1pjzA/TR462-1pjzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.66.1.36
1gjjA	3.3210e+01	1gjjA/TR462-1gjjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.140.1.1 a.140.1.1
1r9cA	4.7030e+01	1r9cA/TR462-1r9cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.32.1.2
2jsbA	4.7726e+01	2jsbA/TR462-2jsbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2c81A	5.1291e+01	2c81A/TR462-2c81A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cbfA	5.7496e+01	1cbfA/TR462-1cbfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.90.1.1
2d1cA	6.1477e+01	2d1cA/TR462-2d1cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001