PFRMAT RR
TARGET TR462
AUTHOR 4008-1775-0004
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa7str2_7near3nsep5.47.data03.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
REMARK 
REMARK Starting column is 1
MODEL 1
MKLSRLVPGVPARIKRLEVSGELHEKLVGMGFVPGEEIEIVQVAPLGDPI
VCKIGNRNITLRKREADLIEVEVVG
4 13 0 8 0.834126
4 14 0 8 0.842728
4 15 0 8 0.771247
4 16 0 8 0.690365
4 17 0 8 0.630982
4 18 0 8 0.563185
4 19 0 8 0.568672
4 26 0 8 0.598809
4 30 0 8 0.526709
4 40 0 8 0.544914
4 41 0 8 0.55382
4 42 0 8 0.534941
4 43 0 8 0.57114
4 54 0 8 0.512389
4 55 0 8 0.522781
5 14 0 8 0.726669
5 15 0 8 0.758095
5 16 0 8 0.665321
5 17 0 8 0.527483
5 18 0 8 0.5101
5 42 0 8 0.542982
6 15 0 8 0.810927
6 16 0 8 0.715466
6 17 0 8 0.828295
6 19 0 8 0.63823
6 23 0 8 0.781911
6 24 0 8 0.584165
6 26 0 8 0.698821
6 27 0 8 0.762504
6 30 0 8 0.586929
6 32 0 8 0.541729
6 33 0 8 0.518367
6 38 0 8 0.691445
6 39 0 8 0.574648
6 40 0 8 0.755832
6 41 0 8 0.683899
6 42 0 8 0.565244
6 43 0 8 0.558785
6 50 0 8 0.518085
6 51 0 8 0.534121
6 52 0 8 0.683408
6 53 0 8 0.528003
6 54 0 8 0.682022
6 59 0 8 0.635038
6 60 0 8 0.535923
6 61 0 8 0.597763
6 69 0 8 0.642033
6 71 0 8 0.665102
7 16 0 8 0.537742
8 17 0 8 0.616955
8 18 0 8 0.56783
8 19 0 8 0.6478
8 42 0 8 0.548365
8 43 0 8 0.589036
8 55 0 8 0.630331
8 63 0 8 0.586521
9 18 0 8 0.626115
9 19 0 8 0.671346
9 42 0 8 0.614333
9 43 0 8 0.685896
9 44 0 8 0.592325
9 45 0 8 0.548573
9 53 0 8 0.544217
9 54 0 8 0.511461
9 55 0 8 0.691962
9 62 0 8 0.523926
9 63 0 8 0.614099
10 19 0 8 0.700504
10 40 0 8 0.534325
10 41 0 8 0.665135
10 42 0 8 0.7524
10 43 0 8 0.820327
10 44 0 8 0.711969
10 45 0 8 0.573596
10 53 0 8 0.694403
10 54 0 8 0.710065
10 55 0 8 0.741028
10 62 0 8 0.640619
10 63 0 8 0.656122
10 72 0 8 0.547638
11 20 0 8 0.524645
11 33 0 8 0.524364
11 38 0 8 0.511543
11 39 0 8 0.719896
11 40 0 8 0.765641
11 41 0 8 0.828407
11 42 0 8 0.825485
11 43 0 8 0.862816
11 44 0 8 0.769428
11 45 0 8 0.589438
11 46 0 8 0.534261
11 52 0 8 0.553046
11 53 0 8 0.81394
11 54 0 8 0.795782
11 55 0 8 0.766931
11 60 0 8 0.618799
11 61 0 8 0.579778
11 62 0 8 0.720025
11 63 0 8 0.698955
11 68 0 8 0.587759
11 69 0 8 0.585979
11 70 0 8 0.632915
11 71 0 8 0.66243
11 72 0 8 0.721798
12 23 0 8 0.737405
12 24 0 8 0.598286
12 26 0 8 0.67961
12 27 0 8 0.843949
12 30 0 8 0.604079
12 32 0 8 0.657701
12 33 0 8 0.5795
12 37 0 8 0.555941
12 38 0 8 0.791845
12 39 0 8 0.815822
12 40 0 8 0.931631
12 41 0 8 0.92641
12 42 0 8 0.880954
12 43 0 8 0.887945
12 44 0 8 0.796017
12 50 0 8 0.606386
12 51 0 8 0.663511
12 52 0 8 0.855266
12 53 0 8 0.859278
12 54 0 8 0.902174
12 55 0 8 0.685889
12 59 0 8 0.702258
12 60 0 8 0.767865
12 61 0 8 0.851981
12 62 0 8 0.752482
12 63 0 8 0.664967
12 66 0 8 0.556622
12 68 0 8 0.675282
12 69 0 8 0.800295
12 70 0 8 0.748529
12 71 0 8 0.878413
12 72 0 8 0.788208
13 23 0 8 0.516143
13 26 0 8 0.532886
13 27 0 8 0.586524
13 37 0 8 0.655996
13 38 0 8 0.753914
13 39 0 8 0.87004
13 40 0 8 0.911948
13 41 0 8 0.92046
13 42 0 8 0.878945
13 43 0 8 0.86711
13 44 0 8 0.74862
13 50 0 8 0.551784
13 51 0 8 0.660981
13 52 0 8 0.785282
13 53 0 8 0.869325
13 54 0 8 0.788634
13 55 0 8 0.710062
13 59 0 8 0.57896
13 60 0 8 0.751237
13 61 0 8 0.729423
13 62 0 8 0.732801
13 63 0 8 0.611866
13 68 0 8 0.717795
13 69 0 8 0.739741
13 70 0 8 0.774363
13 71 0 8 0.823024
13 72 0 8 0.816055
14 23 0 8 0.848817
14 24 0 8 0.727657
14 26 0 8 0.725981
14 27 0 8 0.912955
14 30 0 8 0.753761
14 32 0 8 0.750134
14 33 0 8 0.543105
14 37 0 8 0.628767
14 38 0 8 0.928283
14 39 0 8 0.876966
14 40 0 8 0.972551
14 41 0 8 0.950683
14 42 0 8 0.78551
14 43 0 8 0.734951
14 44 0 8 0.588084
14 49 0 8 0.675762
14 50 0 8 0.794767
14 51 0 8 0.824311
14 52 0 8 0.923867
14 53 0 8 0.728631
14 54 0 8 0.834801
14 59 0 8 0.807421
14 60 0 8 0.716117
14 61 0 8 0.835769
14 66 0 8 0.667108
14 68 0 8 0.670296
14 69 0 8 0.87264
14 70 0 8 0.7722
14 71 0 8 0.911145
14 72 0 8 0.637299
15 24 0 8 0.585602
15 26 0 8 0.615361
15 27 0 8 0.75874
15 30 0 8 0.56471
15 35 0 8 0.5891
15 36 0 8 0.550166
15 37 0 8 0.790549
15 38 0 8 0.880933
15 39 0 8 0.923051
15 40 0 8 0.905442
15 41 0 8 0.898751
15 42 0 8 0.73836
15 43 0 8 0.702634
15 49 0 8 0.651245
15 50 0 8 0.676449
15 51 0 8 0.775677
15 52 0 8 0.710761
15 53 0 8 0.723284
15 54 0 8 0.526316
15 59 0 8 0.610369
15 60 0 8 0.593262
15 61 0 8 0.567322
15 66 0 8 0.517723
15 68 0 8 0.74485
15 69 0 8 0.786429
15 70 0 8 0.783177
15 71 0 8 0.719838
15 72 0 8 0.684747
16 35 0 8 0.559728
16 36 0 8 0.574414
16 37 0 8 0.813418
16 38 0 8 0.816527
16 39 0 8 0.900674
16 40 0 8 0.831539
16 41 0 8 0.800343
16 42 0 8 0.707693
16 43 0 8 0.630563
16 48 0 8 0.509861
16 49 0 8 0.722064
16 50 0 8 0.708263
16 51 0 8 0.743506
16 52 0 8 0.544094
16 53 0 8 0.645624
16 59 0 8 0.515363
16 60 0 8 0.62455
16 67 0 8 0.515714
16 68 0 8 0.700303
16 69 0 8 0.648964
16 70 0 8 0.715428
16 71 0 8 0.560282
16 72 0 8 0.640067
17 26 0 8 0.776508
17 27 0 8 0.877869
17 30 0 8 0.761115
17 32 0 8 0.636718
17 33 0 8 0.586139
17 35 0 8 0.548823
17 37 0 8 0.718185
17 38 0 8 0.905141
17 39 0 8 0.8123
17 40 0 8 0.934118
17 41 0 8 0.802259
17 42 0 8 0.623049
17 43 0 8 0.548998
17 49 0 8 0.745979
17 50 0 8 0.850914
17 51 0 8 0.82718
17 52 0 8 0.849191
17 53 0 8 0.535485
17 54 0 8 0.6842
17 57 0 8 0.518819
17 58 0 8 0.539622
17 59 0 8 0.829066
17 60 0 8 0.713867
17 61 0 8 0.793276
17 66 0 8 0.717175
17 68 0 8 0.637651
17 69 0 8 0.790583
17 70 0 8 0.661332
17 71 0 8 0.81199
18 37 0 8 0.550052
18 38 0 8 0.531208
18 39 0 8 0.640983
18 40 0 8 0.631512
18 49 0 8 0.530118
19 30 0 8 0.562735
19 37 0 8 0.576985
19 38 0 8 0.767145
19 39 0 8 0.630696
19 40 0 8 0.810038
19 41 0 8 0.576061
19 42 0 8 0.522518
19 46 0 8 0.511649
19 48 0 8 0.51034
19 49 0 8 0.583472
19 50 0 8 0.644706
19 51 0 8 0.587809
19 52 0 8 0.578071
19 59 0 8 0.619769
19 60 0 8 0.554144
19 61 0 8 0.582201
19 66 0 8 0.532591
19 69 0 8 0.549332
19 71 0 8 0.551229
23 38 0 8 0.674796
23 40 0 8 0.750657
23 50 0 8 0.518763
23 52 0 8 0.634559
23 54 0 8 0.584412
23 59 0 8 0.597894
23 61 0 8 0.628075
23 71 0 8 0.53057
24 37 0 8 0.539104
24 38 0 8 0.811736
24 39 0 8 0.587295
24 40 0 8 0.844851
24 41 0 8 0.594483
24 43 0 8 0.564266
24 46 0 8 0.575383
24 49 0 8 0.525866
24 50 0 8 0.555983
24 51 0 8 0.554164
24 52 0 8 0.628599
24 54 0 8 0.632736
24 59 0 8 0.633621
24 61 0 8 0.622486
24 66 0 8 0.525756
24 69 0 8 0.567056
24 71 0 8 0.547374
26 40 0 8 0.513022
27 38 0 8 0.909203
27 39 0 8 0.559817
27 40 0 8 0.927541
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27 42 0 8 0.523531
27 43 0 8 0.565058
27 49 0 8 0.694902
27 50 0 8 0.792081
27 51 0 8 0.68621
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27 54 0 8 0.844096
27 59 0 8 0.767971
27 60 0 8 0.577893
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27 66 0 8 0.745964
27 69 0 8 0.789992
27 71 0 8 0.788274
28 37 0 8 0.644577
28 38 0 8 0.884072
28 39 0 8 0.652598
28 40 0 8 0.871648
28 41 0 8 0.704424
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28 59 0 8 0.67576
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28 61 0 8 0.731099
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28 66 0 8 0.780398
28 68 0 8 0.699803
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28 71 0 8 0.682692
29 43 0 8 0.51704
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30 54 0 8 0.600371
30 61 0 8 0.663092
31 40 0 8 0.799353
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31 62 0 8 0.589824
31 63 0 8 0.568999
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37 60 0 8 0.793741
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60 69 0 8 0.887813
60 70 0 8 0.878725
60 71 0 8 0.916969
60 72 0 8 0.869103
61 70 0 8 0.822922
61 71 0 8 0.957557
61 72 0 8 0.72018
62 71 0 8 0.826524
62 72 0 8 0.729294
63 72 0 8 0.557471
END