Best Alignments for TR462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2h3jA	1.2019e+01	2h3jA/TR462-2h3jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcxA	1.2233e+01	2gcxA/TR462-2gcxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	2.3503e+01	1qw1A/TR462-1qw1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lfcA	2.7153e+01	1lfcA/TR462-1lfcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	j.3.1.5
1bymA	3.2123e+01	1bymA/TR462-1bymA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
2z2nA	5.3844e+01	2z2nA/TR462-2z2nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pmjX	5.7520e+01	1pmjX/TR462-1pmjX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
1d9cA	6.0248e+01	1d9cA/TR462-1d9cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.26.1.3
1bhuA	6.1167e+01	1bhuA/TR462-1bhuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.11.1.3
1bhpA	6.3480e+01	1bhpA/TR462-1bhpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.13.1.1
2avxA	6.5045e+01	2avxA/TR462-2avxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pmhX	6.5622e+01	1pmhX/TR462-1pmhX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
1oh4A	7.0491e+01	1oh4A/TR462-1oh4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
1ppjB	7.0570e+01	1ppjB/TR462-1ppjB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1bhp	7.4224e+01	1bhp/TR462-1bhp-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ic2A	7.4456e+01	2ic2A/TR462-2ic2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1
1ijqA	7.5133e+01	1ijqA/TR462-1ijqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.68.5.1 g.3.11.1
2qq9A	7.5607e+01	2qq9A/TR462-2qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q2bA	7.6123e+01	1q2bA/TR462-1q2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.10
1bi0	7.8140e+01	1bi0/TR462-1bi0-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001