Best Alignments for TR462

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1bymA	1.3522e+01	1bymA/TR462-1bymA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.1.2
1lfcA	1.6424e+01	1lfcA/TR462-1lfcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	j.3.1.5
1ijqA	1.7496e+01	1ijqA/TR462-1ijqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.68.5.1 g.3.11.1
2gcxA	1.9448e+01	2gcxA/TR462-2gcxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qw1A	2.0148e+01	1qw1A/TR462-1qw1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h3jA	2.3700e+01	2h3jA/TR462-2h3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qq9A	2.7290e+01	2qq9A/TR462-2qq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v10A	3.0932e+01	1v10A/TR462-1v10A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.6.1.3 b.6.1.3 b.6.1.3
1npeA	3.2033e+01	1npeA/TR462-1npeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.68.5.1
2qpwA	4.5895e+01	2qpwA/TR462-2qpwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rcf	4.8160e+01	1rcf/TR462-1rcf-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3hhrB	4.9128e+01	3hhrB/TR462-3hhrB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
1bhuA	4.9212e+01	1bhuA/TR462-1bhuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.11.1.3
1pmhX	5.1490e+01	1pmhX/TR462-1pmhX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
1pmjX	5.1879e+01	1pmjX/TR462-1pmjX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.18.1.18
1cqkA	5.3791e+01	1cqkA/TR462-1cqkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.2
2ic2A	5.4893e+01	2ic2A/TR462-2ic2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1
1ca1	5.5171e+01	1ca1/TR462-1ca1-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cd9B	5.7674e+01	1cd9B/TR462-1cd9B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1 b.1.2.1
1bhpA	5.7714e+01	1bhpA/TR462-1bhpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.13.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001