PFRMAT RR TARGET TR462 AUTHOR 4008-1775-0004 REMARK From group SAM-TO6 under the direction of REMARK Kevin Karplus. REMARK Residue-residue contact predictions REMARK by George Shackelford and Kevin Karplus REMARK The value given is an approximation of the probability REMARK as provided by the neural network. REMARK The predictions are limited to a score >= .18 which REMARK is an approximation of the probability. REMARK METHOD The predictor is an artificial neural network. METHOD NN: con.aa7str2_7near3nsep5.47.data03.net METHOD Inputs may include separation and sequence length, METHOD e-value statistic based on mutual information values, METHOD a statistic based on propensity of residues in contact. METHOD Other inputs are distributions from alignments and METHOD secondary predictions from SAM-t04 and/or SAM-t06 of METHOD the University of California, Santa Cruz REMARK REMARK Starting column is 77 MODEL 1 ELPLILADDGTYEITKLNGGRRFLFRMKNLGIESGKKIQVSGRRYYIEGR EIDLGYGEATKIWVRRV 80 89 0 8 0.770204 80 90 0 8 0.976783 80 91 0 8 0.941677 80 92 0 8 0.893732 80 93 0 8 0.881317 80 94 0 8 0.542938 80 97 0 8 0.521367 80 98 0 8 0.640534 80 99 0 8 0.85122 80 100 0 8 0.854416 80 101 0 8 0.863623 80 102 0 8 0.764678 80 103 0 8 0.837314 80 104 0 8 0.567067 80 105 0 8 0.48155 80 106 0 8 0.636559 80 108 0 8 0.668784 80 113 0 8 0.510537 80 114 0 8 0.819108 80 115 0 8 0.706793 80 116 0 8 0.843744 80 117 0 8 0.565053 80 119 0 8 0.498604 80 120 0 8 0.542913 80 121 0 8 0.741338 80 122 0 8 0.758585 80 123 0 8 0.833915 80 124 0 8 0.613989 80 125 0 8 0.572579 80 126 0 8 0.539139 80 127 0 8 0.493809 80 128 0 8 0.671138 80 130 0 8 0.585437 80 135 0 8 0.502039 80 136 0 8 0.49887 80 137 0 8 0.536839 80 138 0 8 0.729398 80 139 0 8 0.784854 80 140 0 8 0.843186 81 90 0 8 0.971173 81 91 0 8 0.917058 81 92 0 8 0.837586 81 93 0 8 0.82171 81 97 0 8 0.547566 81 98 0 8 0.678156 81 99 0 8 0.886768 81 100 0 8 0.886609 81 101 0 8 0.87242 81 102 0 8 0.734587 81 103 0 8 0.814944 81 104 0 8 0.487885 81 106 0 8 0.628403 81 108 0 8 0.668908 81 113 0 8 0.54674 81 114 0 8 0.838416 81 115 0 8 0.702193 81 116 0 8 0.819372 81 117 0 8 0.500237 81 119 0 8 0.50716 81 120 0 8 0.587496 81 121 0 8 0.777709 81 122 0 8 0.775991 81 123 0 8 0.820157 81 124 0 8 0.535045 81 125 0 8 0.500987 81 126 0 8 0.508762 81 127 0 8 0.510847 81 128 0 8 0.697685 81 130 0 8 0.57448 81 135 0 8 0.57249 81 136 0 8 0.563742 81 137 0 8 0.589021 81 138 0 8 0.766936 81 139 0 8 0.81087 81 140 0 8 0.821311 82 91 0 8 0.818823 82 92 0 8 0.680897 82 93 0 8 0.729252 82 97 0 8 0.528923 82 98 0 8 0.656705 82 99 0 8 0.885106 82 100 0 8 0.87026 82 101 0 8 0.839877 82 102 0 8 0.641709 82 103 0 8 0.769922 82 106 0 8 0.598405 82 108 0 8 0.616558 82 113 0 8 0.511268 82 114 0 8 0.806924 82 115 0 8 0.575105 82 116 0 8 0.75137 82 120 0 8 0.561863 82 121 0 8 0.7404 82 122 0 8 0.690485 82 123 0 8 0.752206 82 128 0 8 0.645802 82 130 0 8 0.535705 82 135 0 8 0.590349 82 136 0 8 0.563612 82 137 0 8 0.559447 82 138 0 8 0.734905 82 139 0 8 0.757057 82 140 0 8 0.733033 83 92 0 8 0.59776 83 93 0 8 0.618836 83 97 0 8 0.539389 83 98 0 8 0.625732 83 99 0 8 0.780352 83 100 0 8 0.752825 83 101 0 8 0.703263 83 102 0 8 0.528343 83 103 0 8 0.597288 83 106 0 8 0.525496 83 108 0 8 0.535687 83 113 0 8 0.51055 83 114 0 8 0.686116 83 115 0 8 0.530272 83 116 0 8 0.653314 83 119 0 8 0.482357 83 120 0 8 0.547545 83 121 0 8 0.647906 83 122 0 8 0.581414 83 123 0 8 0.616288 83 128 0 8 0.542676 83 135 0 8 0.568568 83 136 0 8 0.571573 83 137 0 8 0.564065 83 138 0 8 0.639674 83 139 0 8 0.625893 83 140 0 8 0.578479 84 98 0 8 0.480677 84 99 0 8 0.517936 87 101 0 8 0.521616 87 102 0 8 0.570106 87 103 0 8 0.588658 87 104 0 8 0.493649 87 116 0 8 0.582574 87 117 0 8 0.489697 87 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