Best Alignments for TR454

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bcgA	2.4471e-26	3bcgA/TR454-3bcgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bhqA	7.5025e-26	3bhqA/TR454-3bhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qcoA	2.8759e-25	2qcoA/TR454-2qcoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cjdA	1.2712e-24	3cjdA/TR454-3cjdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qvtA	1.6259e-24	1qvtA/TR454-1qvtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
1jt6A	1.8522e-24	1jt6A/TR454-1jt6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
2uxuA	3.4001e-24	2uxuA/TR454-2uxuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3crjA	4.0636e-24	3crjA/TR454-3crjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2genA	6.1779e-24	2genA/TR454-2genA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
3c2bA	1.3678e-23	3c2bA/TR454-3c2bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oi8A	1.3867e-23	2oi8A/TR454-2oi8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bqyA	1.5220e-23	3bqyA/TR454-3bqyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3colA	1.7903e-23	3colA/TR454-3colA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b81A	2.4710e-23	3b81A/TR454-3b81A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ibdA	2.9730e-23	2ibdA/TR454-2ibdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dg7A	3.0957e-23	2dg7A/TR454-2dg7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pbxA	3.4703e-23	2pbxA/TR454-2pbxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rktA	3.7402e-23	1rktA/TR454-1rktA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
3bruA	4.4250e-23	3bruA/TR454-3bruA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cdlA	5.2544e-23	3cdlA/TR454-3cdlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001