Best Alignments for TR453

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2plsA	5.0574e-13	2plsA/TR453-2plsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pliA	1.9577e-12	2pliA/TR453-2pliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p13A	2.2019e-12	2p13A/TR453-2p13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nqwA	2.6424e-12	2nqwA/TR453-2nqwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o1rA	3.4341e-12	2o1rA/TR453-2o1rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oaiA	4.2382e-12	2oaiA/TR453-2oaiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p4pA	4.2897e-12	2p4pA/TR453-2p4pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rk5A	2.5755e-11	2rk5A/TR453-2rk5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p3hA	7.8731e-11	2p3hA/TR453-2p3hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r2zA	1.8676e-10	2r2zA/TR453-2r2zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ddjA	4.8594e+00	3ddjA/TR453-3ddjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pbwA	6.2389e+00	1pbwA/TR453-1pbwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.116.1.1
2pp6A	1.2606e+01	2pp6A/TR453-2pp6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vfrA	1.2680e+01	2vfrA/TR453-2vfrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yvsA	2.5210e+01	2yvsA/TR453-2yvsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ei7A	2.6670e+01	1ei7A/TR453-1ei7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.24.5.1
1wvfA	4.8010e+01	1wvfA/TR453-1wvfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.32.1 d.145.1.1
2fztA	5.3845e+01	2fztA/TR453-2fztA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcuA	5.6199e+01	2gcuA/TR453-2gcuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w1oA	5.9117e+01	1w1oA/TR453-1w1oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.32.4 d.145.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001