Best Alignments for TR453

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2plsA	3.9834e-13	2plsA/TR453-2plsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nqwA	5.3273e-13	2nqwA/TR453-2nqwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p3hA	5.6852e-13	2p3hA/TR453-2p3hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o1rA	1.1727e-12	2o1rA/TR453-2o1rA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pliA	2.3495e-12	2pliA/TR453-2pliA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p13A	3.3869e-12	2p13A/TR453-2p13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oaiA	3.7371e-12	2oaiA/TR453-2oaiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p4pA	5.6234e-12	2p4pA/TR453-2p4pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rk5A	2.8125e-11	2rk5A/TR453-2rk5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pvmA	7.9546e-01	1pvmA/TR453-1pvmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.37.1.1 d.37.1.1 g.41.13.1
1pbwA	6.5224e+00	1pbwA/TR453-1pbwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.116.1.1
2ngrB	1.4290e+01	2ngrB/TR453-2ngrB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.116.1.1
2pp6A	1.6805e+01	2pp6A/TR453-2pp6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uvfA	2.2315e+01	2uvfA/TR453-2uvfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fztA	2.4992e+01	2fztA/TR453-2fztA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tx4A	3.1547e+01	1tx4A/TR453-1tx4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.116.1.1
1eb6A	3.5991e+01	1eb6A/TR453-1eb6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.92.1.12
2p18A	3.6863e+01	2p18A/TR453-2p18A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gcuA	4.0901e+01	2gcuA/TR453-2gcuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2inpL	4.3025e+01	2inpL/TR453-2inpL-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001