# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2plsA	86	8.43e-09		
2nqwA	93	1.81e-08		
2p13A	90	1.97e-08		
2pliA	91	2.18e-08		
2o1rA	81	2.91e-08		
2p4pA	86	1.15e-07		
2rk5A	87	4.17e-07		
2oaiA	94	5.57e-07		
2p3hA	101	5.71e-07		
1pvmA	184	8.951	d.37.1.1,d.37.1.1,g.41.13.1	95171,95172,95173
2ngrB	234	12.43	a.116.1.1	19105
1pbwA	216	13.62	a.116.1.1	19103
3ce7A	107	27.22		
1qlwA	328	30.65	c.69.1.15	34722
1tx4A	198	31.62	a.116.1.1	19098
1khtA	192	31.64	c.37.1.1	84401
1d5yA	292	43.96	a.4.1.8,a.4.1.8,d.60.1.2	16055,16056,39532
1izoA	417	45.55	a.104.1.1	83851
1eb6A	177	63.19	d.92.1.12	64895
2f96A	224	70.12	c.55.3.5	133153
1g13A	162	78.79	b.95.1.1	60194