Best Alignments for TR453

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2plsA	2.7597e-13	2plsA/TR453-2plsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pliA	9.0451e-13	2pliA/TR453-2pliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nqwA	9.2721e-13	2nqwA/TR453-2nqwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r2zA	1.0847e-12	2r2zA/TR453-2r2zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p13A	1.2145e-12	2p13A/TR453-2p13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o1rA	1.6063e-12	2o1rA/TR453-2o1rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p4pA	2.5014e-12	2p4pA/TR453-2p4pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oaiA	3.7527e-12	2oaiA/TR453-2oaiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rk5A	1.1776e-11	2rk5A/TR453-2rk5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p3hA	3.4839e-11	2p3hA/TR453-2p3hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ddjA	1.1214e-01	3ddjA/TR453-3ddjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pbwA	4.3324e+00	1pbwA/TR453-1pbwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.116.1.1
2yvsA	5.8287e+00	2yvsA/TR453-2yvsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vfrA	6.2335e+00	2vfrA/TR453-2vfrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wviA	2.2327e+01	1wviA/TR453-1wviA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.108.1.14
2pp6A	2.3326e+01	2pp6A/TR453-2pp6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1w1oA	2.8351e+01	1w1oA/TR453-1w1oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.32.4 d.145.1.1
1wvfA	4.2184e+01	1wvfA/TR453-1wvfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.32.1 d.145.1.1
1i8dA	4.3873e+01	1i8dA/TR453-1i8dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.43.4.3 b.43.4.3
3ddyA	5.4774e+01	3ddyA/TR453-3ddyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001