Best Alignments for TR435

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1zkkA	1.0466e-22	1zkkA/TR435-1zkkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rfiA	2.0435e-22	2rfiA/TR435-2rfiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o8jA	4.1013e-22	2o8jA/TR435-2o8jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ml9A	4.1244e-22	1ml9A/TR435-1ml9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.7.1
2r3aA	5.7569e-22	2r3aA/TR435-2r3aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qpwA	8.0318e-22	2qpwA/TR435-2qpwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bo5A	8.9282e-22	3bo5A/TR435-3bo5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2igqA	1.1723e-21	2igqA/TR435-2igqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f69A	1.9034e-20	2f69A/TR435-2f69A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
1n6aA	9.1835e-20	1n6aA/TR435-1n6aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
1p0yA	5.0428e-11	1p0yA/TR435-1p0yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
2h21A	9.1590e-11	2h21A/TR435-2h21A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
2ag4A	7.7963e+00	2ag4A/TR435-2ag4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.95.1.1
1lm5A	9.1954e+00	1lm5A/TR435-1lm5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.211.2.1
1rutX	2.9009e+01	1rutX/TR435-1rutX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3
2dafA	3.1186e+01	2dafA/TR435-2dafA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vkkA	3.1543e+01	1vkkA/TR435-1vkkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.109.1.2
2pn1A	3.7720e+01	2pn1A/TR435-2pn1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bsyA	3.9473e+01	2bsyA/TR435-2bsyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.4.1 b.85.4.1
1lm7A	4.0842e+01	1lm7A/TR435-1lm7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.211.2.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001