Best Alignments for TR435

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2o8jA	1.7009e-31	2o8jA/TR435-2o8jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rfiA	4.6894e-31	2rfiA/TR435-2rfiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2igqA	3.8824e-30	2igqA/TR435-2igqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r3aA	7.0472e-30	2r3aA/TR435-2r3aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bo5A	8.4357e-30	3bo5A/TR435-3bo5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qpwA	5.9419e-28	2qpwA/TR435-2qpwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f69A	1.3977e-27	2f69A/TR435-2f69A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
1n6aA	1.7554e-27	1n6aA/TR435-1n6aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.76.2.1 b.85.7.1
1zkkA	4.2816e-27	1zkkA/TR435-1zkkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ml9A	9.9728e-26	1ml9A/TR435-1ml9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.7.1
1n3jA	1.5958e-21	1n3jA/TR435-1n3jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.7.2
1p0yA	4.1287e-15	1p0yA/TR435-1p0yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
2h21A	4.5000e-15	2h21A/TR435-2h21A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.166.1.1 b.85.7.3
1lm5A	3.6384e+00	1lm5A/TR435-1lm5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.211.2.1
1lm7A	6.9565e+00	1lm7A/TR435-1lm7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.211.2.1
1v6fA	2.0350e+01	1v6fA/TR435-1v6fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.109.1.2
1gky	2.3220e+01	1gky/TR435-1gky-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h9dA	2.5770e+01	1h9dA/TR435-1h9dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.2.5.6
1f7dA	2.6719e+01	1f7dA/TR435-1f7dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.4.1
1mq7A	2.9360e+01	1mq7A/TR435-1mq7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.4.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001