Best Alignments for TR432

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ri7A	1.7569e-25	2ri7A/TR432-2ri7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r0yA	2.8426e-25	2r0yA/TR432-2r0yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1eqfA	3.6107e-25	1eqfA/TR432-1eqfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.29.2.1 a.29.2.1
2fsaA	3.8461e-23	2fsaA/TR432-2fsaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ossA	6.0544e-22	2ossA/TR432-2ossA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2grcA	7.3669e-22	2grcA/TR432-2grcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e6iA	1.0054e-21	1e6iA/TR432-1e6iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.29.2.1
1x0jA	2.0408e-21	1x0jA/TR432-1x0jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dwwA	2.4589e-21	2dwwA/TR432-2dwwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nxbA	2.5917e-21	2nxbA/TR432-2nxbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oo1A	6.0385e-21	2oo1A/TR432-2oo1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jm4B	3.6675e-03	1jm4B/TR432-1jm4B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.29.2.1
1pcaA	3.4632e+00	1pcaA/TR432-1pcaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.3.1
2gykB	1.0265e+01	2gykB/TR432-2gykB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.1
1fr2B	1.4658e+01	1fr2B/TR432-1fr2B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.1
1pytA	2.1099e+01	1pytA/TR432-1pytA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.3.1
2vlqB	2.3911e+01	2vlqB/TR432-2vlqB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dsjA	2.9341e+01	2dsjA/TR432-2dsjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r9dA	3.2327e+01	1r9dA/TR432-1r9dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.7.1.1
1emvB	3.3269e+01	1emvB/TR432-1emvB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001