Best Alignments for TR432

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ri7A	1.6013e-23	2ri7A/TR432-2ri7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1eqfA	1.9883e-22	1eqfA/TR432-1eqfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.29.2.1 a.29.2.1
2r0yA	2.9838e-22	2r0yA/TR432-2r0yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fsaA	7.4221e-21	2fsaA/TR432-2fsaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dwwA	9.6116e-21	2dwwA/TR432-2dwwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ossA	2.0264e-20	2ossA/TR432-2ossA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2grcA	7.0198e-20	2grcA/TR432-2grcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oo1A	7.5267e-20	2oo1A/TR432-2oo1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e6iA	4.7440e-19	1e6iA/TR432-1e6iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.29.2.1
1jm4B	1.1991e-18	1jm4B/TR432-1jm4B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.29.2.1
1x0jA	4.1536e-18	1x0jA/TR432-1x0jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nxbA	5.0095e-18	2nxbA/TR432-2nxbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1k30A	4.8612e+00	1k30A/TR432-1k30A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.112.1.1
1r9dA	6.0737e+00	1r9dA/TR432-1r9dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.7.1.1
1fr2B	7.8208e+00	1fr2B/TR432-1fr2B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.1
1iuqA	7.9804e+00	1iuqA/TR432-1iuqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.112.1.1
2ayvA	8.6275e+00	2ayvA/TR432-2ayvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.20.1.1
1emvB	9.1490e+00	1emvB/TR432-1emvB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.1
1zdnA	9.9506e+00	1zdnA/TR432-1zdnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.20.1.1
1x23A	9.9704e+00	1x23A/TR432-1x23A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.20.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001