# List of top-scoring protein chains for TR432.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2ossA	127	9.79e-12		
2yw5A	138	2.73e-11		
2rfjA	119	4.23e-11		
2g4aA	116	5.41e-11		
2nxbA	123	5.98e-11		
2dvvA	112	6.60e-11		
2dwwA	114	6.82e-11		
2ouoA	130	7.04e-11		
1x0jA	122	9.01e-11		
2i8nA	114	1.06e-10		
2e7oA	112	1.33e-10		
2oo1A	113	1.54e-10		
2e7nA	117	1.86e-10		
1e6iA	121	2.19e-10	a.29.2.1	16969
2fsaA	174	3.24e-10		
2ri7A	174	3.25e-10		
1jm4B	118	6.12e-10	a.29.2.1	71746
2yynA	135	8.89e-10		
1f68A	103	1.03e-09	a.29.2.1	16970
1eqfA	280	1.08e-09	a.29.2.1,a.29.2.1	16972,16973
1jspB	121	1.18e-09	a.29.2.1	71843
2d9eA	121	2.06e-09		
2datA	123	3.89e-09		
2grcA	129	4.64e-09		
2h60A	128	4.76e-09		
2yqdA	120	6.88e-09		
2i7kA	117	1.10e-08		
2r0vA	346	2.62e-08		
2r10A	361	2.63e-08		
2r0yA	311	2.63e-08		
2r0sA	285	2.64e-08		
2dkwA	131	8.45e-06		
2ro1A	189	1.305		
2p8tA	200	24.00		
1hguA	191	24.65	a.26.1.1	16837
1axiA	191	32.11	a.26.1.1	16832
1a22A	191	38.03	a.26.1.1	16833
1huwA	191	44.86	a.26.1.1	16831
3hhrA	190	45.46	a.26.1.1	16835
1hwgA	191	45.53	a.26.1.1	16834
1stmA	157	67.70	b.121.7.1	23281
2eigA	234	68.84		
1fnyA	237	88.38	b.29.1.1	59920