Best Alignments for TR432

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2ri7A	7.8858e-27	2ri7A/TR432-2ri7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1eqfA	3.9294e-26	1eqfA/TR432-1eqfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.29.2.1 a.29.2.1
2r0yA	8.9254e-26	2r0yA/TR432-2r0yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e6iA	3.1505e-22	1e6iA/TR432-1e6iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.29.2.1
2grcA	3.7276e-22	2grcA/TR432-2grcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nxbA	4.1867e-22	2nxbA/TR432-2nxbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ossA	5.0665e-22	2ossA/TR432-2ossA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fsaA	1.2129e-21	2fsaA/TR432-2fsaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x0jA	1.7623e-21	1x0jA/TR432-1x0jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oo1A	2.9437e-21	2oo1A/TR432-2oo1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dwwA	3.2528e-21	2dwwA/TR432-2dwwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pcaA	2.8424e+00	1pcaA/TR432-1pcaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.3.1
1fr2B	9.0316e+00	1fr2B/TR432-1fr2B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.1
1emvB	9.3718e+00	1emvB/TR432-1emvB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.1
1m55A	9.7299e+00	1m55A/TR432-1m55A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.89.1.3
1mc0A	1.2075e+01	1mc0A/TR432-1mc0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.2.1 d.110.2.1
1alvA	1.2888e+01	1alvA/TR432-1alvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.8
1oohA	1.4265e+01	1oohA/TR432-1oohA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.2.1
1h2eA	1.4392e+01	1h2eA/TR432-1h2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.60.1.1
2gykB	1.5715e+01	2gykB/TR432-2gykB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.4.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001