Best Alignments for TR429

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1mhnA	1.3179e+00	1mhnA/TR429-1mhnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
1g5vA	1.3237e+00	1g5vA/TR429-1g5vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2qqrA	2.4581e+00	2qqrA/TR429-2qqrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gfaA	1.2406e+01	2gfaA/TR429-2gfaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1 b.34.9.1
1wgsA	2.1619e+01	1wgsA/TR429-1wgsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
2f5kA	2.2868e+01	2f5kA/TR429-2f5kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
2eryA	2.4279e+01	2eryA/TR429-2eryA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2hqxA	2.5476e+01	2hqxA/TR429-2hqxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2eqkA	2.9039e+01	2eqkA/TR429-2eqkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fhdA	3.1671e+01	2fhdA/TR429-2fhdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2htgA	3.1735e+01	2htgA/TR429-2htgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bkdN	3.4321e+01	2bkdN/TR429-2bkdN-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ris	3.7964e+01	1ris/TR429-1ris-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1louA	4.1141e+01	1louA/TR429-1louA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.14.1
1vqoK	4.1289e+01	1vqoK/TR429-1vqoK-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.39.1.1
1nmeB	4.5647e+01	1nmeB/TR429-1nmeB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j5aA	4.7588e+01	2j5aA/TR429-2j5aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cy7A	5.0540e+01	2cy7A/TR429-2cy7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dkoB	5.1406e+01	2dkoB/TR429-2dkoB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z0dA	5.6357e+01	2z0dA/TR429-2z0dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001