# List of top-scoring protein chains for t04-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2bkdN	134	2.154		
1fzqA	181	8.867	c.37.1.8	32060
2qqrA	118	10.91		
2yrvA	117	17.34		
2ouxA	286	18.51		
1uptA	171	18.62	c.37.1.8	99767
2ra8A	362	19.20		
1kshA	186	19.30	c.37.1.8	72914
2oj5A	165	20.81		
2hdeA	148	21.20		
1o3yA	166	21.37	c.37.1.8	86618
1mr3F	181	21.58	c.37.1.8	79422
3bh0A	315	23.79		
1jj2B	337	28.03	b.43.3.2	63086
1hurA	180	28.23	c.37.1.8	32052
1qwdA	177	34.40	b.60.1.1	96471
1em2A	229	37.14	d.129.3.2	41321
1m70A	190	41.73	a.3.1.4,a.3.1.4	91200,91201
2nr3A	183	43.81		
2eryA	172	47.41	c.37.1.8	132306
3bz6A	183	49.01		
1xkwA	665	49.98		
1xr4A	509	53.84	c.124.1.2,c.124.1.2	115860,115861
2hqxA	246	54.02	b.34.9.1	136675
1r8sA	164	54.66	c.37.1.8	97247
2b2yA	187	60.47	b.34.13.2,b.34.13.2	127754,127755
1gadO	330	61.00	c.2.1.3,d.81.1.1	29950,39865
1nnvA	110	62.96	d.17.7.1	92012
1vheA	373	67.69	b.49.3.1,c.56.5.4	100669,100670
1fvpA	231	68.27	c.1.16.2	29556
1louA	101	75.91	d.58.14.1	39323
2rhsB	800	81.40		
2dyqA	144	83.28		
2aukA	190	89.61