Best Alignments for TR429

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1wgsA	1.8603e+01	1wgsA/TR429-1wgsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
1mhnA	2.0152e+01	1mhnA/TR429-1mhnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2gfaA	4.2447e+01	2gfaA/TR429-2gfaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1 b.34.9.1
2gecA	4.4901e+01	2gecA/TR429-2gecA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.148.1.1
1xu1R	4.8210e+01	1xu1R/TR429-1xu1R-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.24.1.2
1g5vA	5.0389e+01	1g5vA/TR429-1g5vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2bxxA	5.2027e+01	2bxxA/TR429-2bxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.148.1.1
2jn9A	5.8337e+01	2jn9A/TR429-2jn9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zxfA	6.3294e+01	1zxfA/TR429-1zxfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.129.3.5
2f5kA	6.8478e+01	2f5kA/TR429-2f5kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
1qwdA	6.9761e+01	1qwdA/TR429-1qwdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.60.1.1
2qqrA	7.4321e+01	2qqrA/TR429-2qqrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1g2qA	7.7655e+01	1g2qA/TR429-1g2qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.61.1.1
2htgA	7.9834e+01	2htgA/TR429-2htgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2btlA	8.0462e+01	2btlA/TR429-2btlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.148.1.1
2fkbA	8.1498e+01	2fkbA/TR429-2fkbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.113.1.2
1jfxA	8.3887e+01	1jfxA/TR429-1jfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.8.8
2j5aA	8.9241e+01	2j5aA/TR429-2j5aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ofzA	9.0455e+01	2ofzA/TR429-2ofzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hqxA	9.0606e+01	2hqxA/TR429-2hqxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001