Best Alignments for TR429

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1mhnA	3.4176e-01	1mhnA/TR429-1mhnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
1g5vA	8.1820e-01	1g5vA/TR429-1g5vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
1wgsA	2.1517e+00	1wgsA/TR429-1wgsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
1wmvA	1.3502e+01	1wmvA/TR429-1wmvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qqrA	1.4824e+01	2qqrA/TR429-2qqrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f5kA	1.7257e+01	2f5kA/TR429-2f5kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
2btlA	1.8900e+01	2btlA/TR429-2btlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.148.1.1
1wl8A	2.7554e+01	1wl8A/TR429-1wl8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j5aA	2.8187e+01	2j5aA/TR429-2j5aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bxxA	2.8808e+01	2bxxA/TR429-2bxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.148.1.1
1ecxA	2.9036e+01	1ecxA/TR429-1ecxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.3
2gecA	3.2092e+01	2gecA/TR429-2gecA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.148.1.1
2gfaA	3.3296e+01	2gfaA/TR429-2gfaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1 b.34.9.1
2e6iA	3.3775e+01	2e6iA/TR429-2e6iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b94A	3.4701e+01	1b94A/TR429-1b94A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.2
1eonA	3.8349e+01	1eonA/TR429-1eonA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.2
2eryA	3.9009e+01	2eryA/TR429-2eryA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2eqkA	4.0200e+01	2eqkA/TR429-2eqkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1b96A	4.2286e+01	1b96A/TR429-1b96A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.52.1.2
1c30B	4.2518e+01	1c30B/TR429-1c30B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001