# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2fkbA	180	6.990	d.113.1.2	133650
2jn9A	105	8.866		
1j1nA	492	19.57	c.94.1.1	83978
2r7gA	347	20.97		
2o5fA	171	24.18		
2bemA	170	25.18	b.1.18.2	116698
1fuiA	591	26.46	b.43.2.1,c.85.1.1	25674,35444
2arhA	203	31.42	d.108.1.9	127197
1xu1R	42	35.30	g.24.1.2	116036
2hbwA	235	40.37		
1su0B	159	41.44	d.224.1.2	106015
1xniA	118	43.34	b.34.9.1,b.34.9.1	115582,115583
1wgxA	73	45.55	a.4.1.3	114626
2gecA	139	46.51	b.148.1.1	135059
1wgsA	133	46.71	b.34.13.3	114622
2ov6A	101	49.22		
1sc3A	178	56.55	c.17.1.1	105416
2g3rA	123	56.78	b.34.9.1,b.34.9.1	134570,134571
2hxwA	237	58.29		
2ojwA	384	61.88		
2evrA	246	67.05	b.34.11.3,d.3.1.16	132440,132441
1wz4A	23	71.04		
2bxxA	134	85.86	b.148.1.1	129446
2cmtA	172	88.92