a2m2html output for tmp.a2m

Citations (SAM, SAM-T99, HMMs)

R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting remote protein homologies, Bioinformatics 14(10):846-856, 1998.
A. Krogh et al., Hidden Markov models in computational biology: Applications to protein modeling, JMB 235:1501-1531, Feb 1994.

Sequence numbers correspond to the following labels:

- TR429
- gi|189069490|dbj|BAG37156.1|_129:208 unnamed protein product [Homo sapiens]
- gi|115430233|ref|NP_037414.3|_142:221 ubiquitin-like, containing PHD and RING finger domains, 1 isoform 2 [Homo sapiens]
- gi|119589594|gb|EAW69188.1| ubiquitin-like, containing PHD and RING finger domains, 1, isoform CRA_b [Homo sapiens]
- gi|116138198|gb|AAI13876.2|_142:221 Ubiquitin-like, containing PHD and RING finger domains, 1 [Homo sapiens]
- gi|167773777|gb|ABZ92323.1| ubiquitin-like, containing PHD and RING finger domains, 1 [synthetic construct]
- gi|6815251|gb|AAF28469.1|AF129507_1_129:208 transcription factor ICBP90 [Homo sapiens]
- gi|158259801|dbj|BAF82078.1|_129:208 unnamed protein product [Homo sapiens]
- gi|115430235|ref|NP_001041666.1|_129:208 ubiquitin-like, containing PHD and RING finger domains, 1 isoform 1 [Homo sapiens]
- gi|67462077|sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc finger protein Np95) (Nuclear protein 95) (HuNp95) (RING finger protein 106) [Taxonomy]
- gi|14190527|gb|AAK55744.1|AF274048_1 nuclear zinc finger protein Np95 [Homo sapiens]
- gi|54781359|gb|AAV40831.1| ubiquitin-like, containing PHD and RING finger domains, 1 [Homo sapiens]
- gi|117939141|dbj|BAF36719.1| hNP95 [Homo sapiens]
- gi|117939143|dbj|BAF36720.1| hNP95 [Homo sapiens]
- gi|119589593|gb|EAW69187.1| ubiquitin-like, containing PHD and RING finger domains, 1, isoform CRA_a [Homo sapiens]
- gi|148342526|gb|ABQ59043.1| UHRF1 protein [Homo sapiens]
- gi|114674773|ref|XP_001139655.1|_129:208 PREDICTED: ubiquitin-like, containing PHD and RING finger domains, 1 isoform 1 [Pan troglodytes]
- gi|114674775|ref|XP_001139745.1| PREDICTED: ubiquitin-like, containing PHD and RING finger domains, 1 isoform 2 [Pan troglodytes]
- gi|114674777|ref|XP_512293.2| PREDICTED: ubiquitin-like, containing PHD and RING finger domains, 1 isoform 4 [Pan troglodytes]
- gi|114674779|ref|XP_001139916.1| PREDICTED: ubiquitin-like, containing PHD and RING finger domains, 1 isoform 3 [Pan troglodytes]
- gi|119589595|gb|EAW69189.1|_193:272 ubiquitin-like, containing PHD and RING finger domains, 1, isoform CRA_c [Homo sapiens]
- gi|73987090|ref|XP_868453.1|_132:211 PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 isoform 2 [Canis familiaris]
- gi|73987094|ref|XP_868462.1|_132:211 PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 isoform 4 [Canis familiaris]
- gi|73987096|ref|XP_854422.1|_132:211 PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 isoform 1 [Canis familiaris]
- gi|73987098|ref|XP_868468.1|_132:211 PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 isoform 5 [Canis familiaris]
- gi|73987092|ref|XP_868458.1|_132:211 PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 isoform 3 [Canis familiaris]
- gi|109123024|ref|XP_001082893.1|_129:210 PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 isoform 2 [Macaca mulatta]
- gi|109123026|ref|XP_001082762.1| PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 isoform 1 [Macaca mulatta]
- gi|109123028|ref|XP_001083019.1| PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 isoform 3 [Macaca mulatta]
- gi|109123030|ref|XP_001083134.1| PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 isoform 4 [Macaca mulatta]
- gi|57114344|ref|NP_001008882.1|_180:259 ubiquitin-like, containing PHD and RING finger domains, 1 [Rattus norvegicus]
- gi|32527729|gb|AAP86266.1| Ac2-121 [Rattus norvegicus]
- gi|67461836|sp|Q7TPK1|UHRF1_RAT_125:204 E3 ubiquitin-protein ligase UHRF1 (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Liver regeneration-related protein LRRG126) [Taxonomy]
- gi|149028206|gb|EDL83644.1|_125:204 ubiquitin-like, containing PHD and RING finger domains, 1 (mapped), isoform CRA_a [Rattus norvegicus]
- gi|74147355|dbj|BAE27560.1|_125:204 unnamed protein product [Mus musculus]
- gi|74208423|dbj|BAE26398.1|_125:204 unnamed protein product [Mus musculus]
- gi|74139714|dbj|BAE31708.1|_125:204 unnamed protein product [Mus musculus]
- gi|74199030|dbj|BAE30730.1| unnamed protein product [Mus musculus]
- gi|74219676|dbj|BAE29605.1| unnamed protein product [Mus musculus]
- gi|74225350|dbj|BAE31605.1| unnamed protein product [Mus musculus]
- gi|18380940|gb|AAH22167.1|_125:204 Ubiquitin-like, containing PHD and RING finger domains, 1 [Mus musculus]
- gi|161621269|ref|NP_035061.3|_125:204 ubiquitin-like, containing PHD and RING finger domains, 1 isoform A [Mus musculus]
- gi|161621271|ref|NP_001104548.1| ubiquitin-like, containing PHD and RING finger domains, 1 isoform A [Mus musculus]
- gi|67462071|sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 (Ubiquitin-like PHD and RING finger domain-containing protein 1) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Nuclear zinc finger protein Np95) (Nuclear protein 95) [Taxonomy]
- gi|14190525|gb|AAK55743.1|AF274046_1 nuclear zinc finger protein Np95 [Mus musculus]
- gi|4220590|dbj|BAA74579.1| nuclear protein np95 [Mus musculus]
- gi|74150733|dbj|BAE25499.1| unnamed protein product [Mus musculus]
- gi|74211529|dbj|BAE26496.1| unnamed protein product [Mus musculus]
- gi|161621273|ref|NP_001104550.1|_125:204 ubiquitin-like, containing PHD and RING finger domains, 1 isoform B [Mus musculus]
- gi|162287241|ref|NP_001104549.1| ubiquitin-like, containing PHD and RING finger domains, 1 isoform B [Mus musculus]
- gi|74151003|dbj|BAE27632.1| unnamed protein product [Mus musculus]
- gi|74198788|dbj|BAE30624.1|_125:204 unnamed protein product [Mus musculus]
- gi|17939938|dbj|BAB79496.1|_125:204 Np95 [Mus musculus]
- gi|148706214|gb|EDL38161.1|_169:248 ubiquitin-like, containing PHD and RING finger domains, 1, isoform CRA_a [Mus musculus]
- gi|156718126|ref|NP_001096568.1|_135:212 ubiquitin-like, containing PHD and RING finger domains, 1 [Bos taurus]
- gi|154757485|gb|AAI51672.1| UHRF1 protein [Bos taurus]
- gi|126323137|ref|XP_001365790.1|_132:211 PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 [Monodelphis domestica]
- gi|73970972|ref|XP_864401.1|_122:203 PREDICTED: similar to Np95-like ring finger protein isoform b isoform 5 [Canis familiaris]
- gi|73970974|ref|XP_864420.1|_122:203 PREDICTED: similar to Np95-like ring finger protein isoform b isoform 6 [Canis familiaris]
- gi|73970976|ref|XP_531928.2|_122:234 PREDICTED: similar to Ubiquitin-like containing PHD and RING finger domains protein 2 (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) isoform 1 [Canis familiaris]
- gi|73970966|ref|XP_851749.1|_122:234 PREDICTED: similar to Ubiquitin-like containing PHD and RING finger domains protein 2 (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) isoform 2 [Canis familiaris]
- gi|124430766|ref|NP_659122.2|_122:234 ubiquitin-like, containing PHD and RING finger domains 2 [Mus musculus]
- gi|67462063|sp|Q7TMI3|UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2 (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) [Taxonomy]
- gi|33589239|dbj|BAC81739.1| Np95-like ring finger protein [Mus musculus]
- gi|37805363|gb|AAH60241.1| Ubiquitin-like, containing PHD and RING finger domains 2 [Mus musculus]
- gi|148709751|gb|EDL41697.1| ubiquitin-like, containing PHD and RING finger domains 2, isoform CRA_b [Mus musculus]
- gi|21069047|gb|AAM33798.1|AF274047_1_122:234 nuclear zinc finger protein Np97 [Mus musculus]
- gi|148709750|gb|EDL41696.1|_215:327 ubiquitin-like, containing PHD and RING finger domains 2, isoform CRA_a [Mus musculus]
- gi|26348883|dbj|BAC38081.1|_122:234 unnamed protein product [Mus musculus]
- gi|157821129|ref|NP_001101055.1|_122:234 ubiquitin-like, containing PHD and RING finger domains 2 [Rattus norvegicus]
- gi|149062687|gb|EDM13110.1| ubiquitin-like, containing PHD and RING finger domains 2 (predicted) [Rattus norvegicus]
- gi|118103345|ref|XP_418269.2|_111:191 PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains, 1 [Gallus gallus]
- gi|156121185|ref|NP_001095740.1|_122:234 Np95-like ring finger protein [Bos taurus]
- gi|151555668|gb|AAI48950.1| UHRF2 protein [Bos taurus]
- gi|23312364|ref|NP_690856.1|_121:233 Np95-like ring finger protein [Homo sapiens]
- gi|67462076|sp|Q96PU4|UHRF2_HUMAN E3 ubiquitin-protein ligase UHRF2 (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear zinc finger protein Np97) (RING finger protein 107) [Taxonomy]
- gi|21069049|gb|AAM33799.1|AF274049_1 nuclear zinc finger protein Np97 [Homo sapiens]
- gi|15667627|dbj|BAB68317.1| Np95-like ring finger protein [Homo sapiens]
- gi|55662522|emb|CAH74119.1| ubiquitin-like, containing PHD and RING finger domains, 2 [Homo sapiens]
- gi|55957137|emb|CAI13293.1| ubiquitin-like, containing PHD and RING finger domains, 2 [Homo sapiens]
- gi|119579147|gb|EAW58743.1| hCG2011540, isoform CRA_b [Homo sapiens]
- gi|168278369|dbj|BAG11064.1| E3 ubiquitin-protein ligase UHRF2 [synthetic construct]
- gi|114623731|ref|XP_528534.2|_121:233 PREDICTED: Np95-like ring finger protein isoform 2 [Pan troglodytes]
- gi|114623729|ref|XP_001142916.1|_121:233 PREDICTED: Np95-like ring finger protein isoform 1 [Pan troglodytes]
- gi|20306314|gb|AAH28397.1|_121:233 UHRF2 protein [Homo sapiens]
- gi|157928904|gb|ABW03737.1| ubiquitin-like, containing PHD and RING finger domains, 2 [synthetic construct]
- gi|157928214|gb|ABW03403.1|_121:233 ubiquitin-like, containing PHD and RING finger domains, 2 [synthetic construct]
- gi|156717408|ref|NP_001096244.1|_119:229 hypothetical protein LOC100124801 [Xenopus tropicalis]
- gi|134025409|gb|AAI35390.1| LOC100124801 protein [Xenopus tropicalis]
- gi|149634869|ref|XP_001507628.1|_160:272 PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
- gi|149736987|ref|XP_001492651.1|_117:229 PREDICTED: similar to Np95-like ring finger protein [Equus caballus]
- gi|126335635|ref|XP_001365423.1|_125:236 PREDICTED: hypothetical protein isoform 1 [Monodelphis domestica]
- gi|126335637|ref|XP_001365488.1|_125:236 PREDICTED: hypothetical protein isoform 2 [Monodelphis domestica]
- gi|47216586|emb|CAG00621.1|_133:209 unnamed protein product [Tetraodon nigroviridis]
- gi|149269388|ref|XP_001477928.1|_125:201 PREDICTED: hypothetical protein [Mus musculus]
- gi|148224431|ref|NP_001091384.1|_120:229 Np95-like ring finger protein [Xenopus laevis]
- gi|118764339|gb|AAI28674.1| Uhrf2 protein [Xenopus laevis]
- gi|62739288|gb|AAH94105.1|_123:204 LOC432234 protein [Xenopus laevis]
- gi|47938721|gb|AAH72079.1|_123:204 LOC432234 protein [Xenopus laevis]
- gi|83405203|gb|AAI10934.1|_123:204 LOC432234 protein [Xenopus laevis]
- gi|47223598|emb|CAF99207.1|_198:324 unnamed protein product [Tetraodon nigroviridis]
- gi|94734040|emb|CAK04045.1|_131:200 ubiquitin-like, containing PHD and RING finger domains, 1 [Danio rerio]
- gi|47085807|ref|NP_998242.1|_131:200 ubiquitin-like, containing PHD and RING finger domains, 1 [Danio rerio]
- gi|34783763|gb|AAH58055.1| Ubiquitin-like, containing PHD and RING finger domains, 1 [Danio rerio]
- gi|49618893|gb|AAT68031.1|_131:200 NP95 [Danio rerio]
- gi|125847356|ref|XP_001338282.1|_100:216 PREDICTED: similar to ubiquitin-like, containing PHD and RING finger domains 2, partial [Danio rerio]
- gi|73970970|ref|XP_864378.1|_122:189 PREDICTED: similar to Np95-like ring finger protein isoform b isoform 4 [Canis familiaris]
- gi|73970968|ref|XP_864358.1|_122:189 PREDICTED: similar to Np95-like ring finger protein isoform b isoform 3 [Canis familiaris]
- gi|26326961|dbj|BAC27224.1|_122:216 unnamed protein product [Mus musculus]
- gi|26334573|dbj|BAC30987.1| unnamed protein product [Mus musculus]
- gi|26342176|dbj|BAC34750.1| unnamed protein product [Mus musculus]
- gi|74196808|dbj|BAE43129.1|_108:202 unnamed protein product [Mus musculus]
- gi|156382373|ref|XP_001632528.1|_122:191 predicted protein [Nematostella vectensis]
- gi|156219585|gb|EDO40465.1| predicted protein [Nematostella vectensis]
- gi|118344046|ref|NP_001071846.1|_114:179 UHRF2 protein [Ciona intestinalis]
- gi|70571420|dbj|BAE06743.1| Ci-UHRF2 [Ciona intestinalis]
- gi|26335045|dbj|BAC31223.1|_122:181 unnamed protein product [Mus musculus]
- gi|67967595|dbj|BAE00280.1|_121:176 unnamed protein product [Macaca fascicularis]

                       10        20        30                40        
                       |         |         |                 |        
   1 ...E.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSRDE.P.CSST.
   2 mwdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSRDE.P.CSST.
   3 mwdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSRDE.P.CSST.
   4 mwdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSRDE.P.CSST.
   5 mwdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSRDE.P.CSST.
   6 mwdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSRDE.P.CSST.
   7 mwdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSRDE.P.CSST.
   8 mwdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSRDE.P.CSST.
   9 mwdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSRDE.P.CSST.
  10 twdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSQDE.P.CSST.
  11 twdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSQDE.P.CSST.
  12 twdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSQDE.P.CSST.
  13 twdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSQDE.P.CSST.
  14 twdE.TEL...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSQDE.P.CSST.
  15 mwdE.TEM...G..LYKVNEYVDARDTNMGAWFEAQVVRV...T..R..K.APSRDE.P.CSST.
  16 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..K.ALSEEE.P.CSSS.
  17 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..K.ALSEEE.P.CSSS.
  18 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..K.ALSEEE.P.CSSS.
  19 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..R.ALSEDE.P.CSSS.
  20 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..R.ALSEDE.P.CSSS.
  21 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..R.ALSEDE.P.CSSS.
  22 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..R.ALSEDE.P.CSSS.
  23 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..R.ALSEDE.P.CSSS.
  24 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..R.ALSEDE.P.CSSS.
  25 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..R.ALSEDE.P.CSSS.
  26 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..R.ALSEDE.P.CSSS.
  27 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..R.ALSEDE.P.CSSS.
  28 ecdE.TEL...G..LYKVGEYVDARDTNMGAWFEAKVIRV...T..R..K.APAHDQ.P.--SS.
  29 dwiD.PGF...G..LYKINEYVDARDMNMGAWFEGILVNV...T..R..K.EREASE.S.SDNE.
  30 fliD.PGI...G..LYKVNELVDARDVGLGAWFEARIRSV...T..R..N.TNKLDSvPsTSNS.
  31 fliD.PGI...G..LYKVNELVDARDVGLGAWFEARIRSV...T..R..N.TNKLDSvPsTSNS.
  32 fliD.PGI...G..LYKVNELVDARDVGLGAWFEARIRSV...T..RasD.GHSRGKtP.LKNGs
  33 fliD.PGI...G..LYKVNELVDARDVGLGAWFEARIRSV...T..RasD.GHSRGKtP.LKNGs
  34 cliD.PGF...G..LYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GHSRGKtP.LKNGs
  35 cliD.PGF...G..LYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GHSRGKtP.LKNGs
  36 cliD.PGF...G..LYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GHSRGKtP.LKNGs
  37 cliD.PGF...G..LYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GHSRGKtP.LKNGs
  38 cliD.PGF...G..LYKVNELVDARDAGLGAWFEAHIHSV...T..RasD.GHSRGKtP.LKNGn
  39 dwaD.PGF...G..LYKIHDLVDARDMNMGAWFEAQVVNV...T..Rr.K.AANESC.A.VADQ.
  40 fliD.PGI...G..LYKVNELVDARDVALGAWFEARIHSV...T..RasD.GHSRGKtP.LKNGs
  41 rliD.PGF...G..IYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GQSRGKtP.LKNGs
  42 rliD.PGF...G..IYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GQSRGKtP.LKNGs
  43 rliD.PGF...G..IYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GQSRGKtP.LKNGs
  44 rliD.PGF...G..IYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GQSRGKtP.LKNGs
  45 rliD.PGF...G..IYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GQSRGKtP.LKNGs
  46 fliD.PGI...G..IYKINELVDARDVSIGAWFEAHVENV...Tq.K..K.AQKNGK.A.YLKGg
  47 fliD.PGI...G..LYKVNELVDARDVSIGAWFEAHIENV...T..RvaK.GHKNGK.A.QAKSg
  48 flvD.PGI...G..IYKVNELVDARDVGLGAWFEARIHSV...T..RasD.GHSRGKtP.LKNGs
  49 sliD.PGI...G..IYKINELVDARDDTLGAWFEAHIKSVssaT..K..Q.HKSGKA.K.AKSGc
  50 sliD.PGI...G..IYKINELVDARDDTLGAWFEAHIKSVssaT..K..Q.HKSGKA.K.AKSGc
  51 elvD.PGF...G..LYKLNELVDARDLNMGAWFEAQIVNV...T..K..T.P---KT.P.EEGA.
  52 vweD.TDL...G..LYKVNEYVDVRDNIFGAWFEAQVVQV...Q..K..R.ALSEDE.P.CSSS.
  53 fliD.PGI...G..IYKINELVDARDVSIGSWFEAHVENV...TqnK..K.AQKNGK.A.YLKGg
  54 siiG.ENV...GtsLYKKNDLVDARDLNMGAWFEAQIVNV...S..K..KvGPYGTL.P.EVS-.
  55 siiG.ENV...GtsLYKKNDLVDARDLNMGAWFEAQIVNV...S..K..KvGPYGTL.P.EVS-.
  56 siiG.ENV...GtsLYKKNDLVDARDLNMGAWFEAQIVNV...S..K..KvGPYGTL.P.EVS-.
  57 tliD.PGI...G..VYKINELVDCRDVSIGAWFEACVEKV...T..R..A.PKGQIT.P.TKGKv
  58 dliD.PGF...G..FYKINEFVDARDLNMGAWFEAQIVKV...T..K..-.-----T.P.AEDG.
  59 dliD.PGF...G..FYKINEFVDARDLNMGAWFEAQIVKV...T..K..T.PAEDGG.P.----.
  60 dliD.PGF...G..FYKINEFVDARDLNMGAWFEAQIVKV...T..K..-.-----T.P.AEDG.
  61 fliD.PGI...G..VFKVNELVDCRDVSIGAWFEAVIEKV...S..P..A.SKAQKN.K.DSAAp
  62 fliD.PGI...G..LYKVNELVDARDVGLGAWFEARIRSV...T..R..A.SDGHSR.-.----.
  63 fliD.PGI...G..LYKVNELVDARDVGLGAWFEARIRSV...T..R..A.SDGHSR.-.----.
  64 cliD.PGF...G..LYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GHSRGKtP.LKNGs
  65 cliD.PGF...G..LYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GHSRGKtP.LKNGs
  66 sskD.KSVik.S..IYKKGEFIDAKDPSMGAWFEAEIVDI...S..L..K.DESD--.P.----.
  67 ...DtPSTsceG..LYKINALIDAQDTDVGAWFEAKVVNV...T..K..G.------.-.----.
  68 cliD.PGF...G..LYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GHSRGKtP.LKNG.
  69 rliD.PGF...G..IYKVNELVDARDVGLGAWFEAHIHSV...T..RasD.GQSRGKtP.LKNG.


             50           60        70        80   
             |            |         |         |   
   1 ....SRPALEED..VIYH.VKYDDYPENGVVQMNSRDVRARA...
   2 ....SRPALEED..VIYH.VKYDDYPENGVVQMNSRDVRARArti
   3 ....SRPALEED..VIYH.VKYDDYPENGVVQMNSRDVRARArti
   4 ....SRPALEED..VIYH.VKYDDYPENGVVQMNSRDVRARArti
   5 ....SRPALEED..VIYH.VKYDDYPENGVVQMNSRDVRARArti
   6 ....SRPALEED..VIYH.VKYDDYPENGVVQMNSRDVRARArti
   7 ....SRPALEED..VIYH.VKYDDYPENGVVQMNSRDVRARArti
   8 ....SRPALEED..VIYH.VKYDDYPENGVVQMNSRDVRARArti
   9 ....SRPALEED..VIYH.VKYDDYPENGVVQMNSRDVRARArti
  10 ....SSSTPEDD..VIYH.VKYDDYPENGVVQMSSRDVRARArni
  11 ....SSSTPEDD..VIYH.VKYDDYPENGVVQMSSRDVRARArni
  12 ....SSSTPEDD..VIYH.VKYDDYPENGVVQMSSRDVRARArni
  13 ....SSSTPEDD..VIYH.VKYDDYPENGVVQMSSRDVRARArni
  14 ....SSSTPEDD..VIYH.VKYDDYPENGVVQMSSRDVRARArni
  15 ....SSPALEEDadVIYH.VKYDDYPENGVVQMNSRDVRARArti
  16 ....AIMAPEDD..IMYH.IKYDDYPEHGVDIVKAKNVRARArtv
  17 ....AIMAPEDD..IMYH.IKYDDYPEHGVDIVKAKNVRARArtv
  18 ....AIMAPEDD..IMYH.IKYDDYPEHGVDIVKAKNVRARArtv
  19 ....AVKTSEDD..IMYH.VKYDDYPEHGVDIVKAKNVRARArtv
  20 ....AVKTSEDD..IMYH.VKYDDYPEHGVDIVKAKNVRARArtv
  21 ....AVKTSEDD..IMYH.VKYDDYPEHGVDIVKAKNVRARArtv
  22 ....AVKTSEDD..IMYH.VKYDDYPEHGVDIVKAKNVRARArtv
  23 ....AVKTSEDD..IMYH.VKYDDYPEHGVDIVKAKNVRARArtv
  24 ....AVKTSEDD..IMYH.VKYDDYPEHGVDIVKAKNVRARArtv
  25 ....AVKTSEDD..IMYH.VKYDDYPEHGVDIVKAKNVRARArtv
  26 ....AVKTSEDD..IMYH.VKYDDYPEHGVDIVKAKNVRARArtv
  27 ....AVKTSEDD..IMYH.VKYDDYPEHGVDIVKAKNVRARArtv
  28 ....SSSKPEDD..IIYH.VTYDDYPENGVVQMTSQNVRARArht
  29 ....DGQVAEED..VIYH.VKYEDYPENGVVKLSSKDVRARArti
  30 ....DSVAADED..VIYH.IEYDEYPESGTVEINVKDLRPRArtn
  31 ....DSVAADED..VIYH.IEYDEYPESGTVEINVKDLRPRArtn
  32 30nsDSVAADED..VIYH.IEYDEYPESGTVEINVKDLRPRArtn
  33 30nsDSVAADED..VIYH.IEYDEYPESGTVEINVKDLRPRArtn
  34 30nsDSVAADED..VIYH.IEYDEYPESGILEMNVKDLRPRArti
  35 30nsDSVAADED..VIYH.IEYDEYPESGILEMNVKDLRPRArti
  36 30nsDSVAADED..VIYH.IEYDEYPESGILEMNVKDLRPRArti
  37 30nsDSVAADED..VIYH.IEYDEYPESGILEMNVKDLRPRArti
  38 30nsDSVAADED..VIYH.IEYDEYPESGTLEMNAKELRPRArti
  39 ....QTTIPEED..VIYH.VKYEDYPENGVVELSSNDVRSRArti
  40 30nsDSVAADED..VIYH.IEYDEYPESGTVEINVKDLRPRArtt
  41 30nsDCVAADED..VIYH.IQYDEYPESGTLEMNVKDLRPRArti
  42 30nsDCVAADED..VIYH.IQYDEYPESGTLEMNVKDLRPRArti
  43 30nsDCVAADED..VIYH.IQYDEYPESGTLEMNVKDLRPRArti
  44 30nsDCVAADED..VIYH.IQYDEYPESGTLEMNVKDLRPRArti
  45 30nsDCVAADED..VIYH.IQYDEYPESGTLEMNVKDLRPRArti
  46 30ynDILDEDEN..VIYH.IKYDDYPENGLVEMDLSNLRPRArtl
  47 31sySDSMDTEE..AIYH.IKYDEYPENGIIEMGASNLRPRArti
  48 30nsDSVAADED..VIYH.IEYDEYPESGTVEINVKDLRPRArtt
  49 29spSNSMNSED..IIYH.IEYDEYPENGIIEMRSKNLRPRArkt
  50 29spSNSMNSED..IIYH.IEYDEYPENGIIEMRSKNLRPRArkt
  51 ....GEGRAEEE..ILYH.VKFEDYPENGVIQLLGKDVRPRArtv
  52 ....AVKTSEDD..IMYH.V---NYPEHGVDIVKAKNVRARArtv
  53 28ynDILDDNEN..VIYH.IKYDDYPENGLVEMDLSNLRPRArtl
  54 ....DTSVTSDA..IIYH.VKYEDYPENGVVQLTCKDVRLRArtt
  55 ....DTSVTSDA..IIYH.VKYEDYPENGVVQLTCKDVRLRArtt
  56 ....DTSVTSDA..IIYH.VKYEDYPENGVVQLTCKDVRLRArtt
  57 47aaETKEREED..AVYH.IKYEDYPENGVVAMKPVDVRPRArtl
  58 ....GA----ED..IVYH.VKYEDYPENGVVQLRGKDVRPRArtv
  59 ....------EE..IVYH.VKYEDYPENGVVQLRGKDVRPRArtv
  60 ....GA----ES..IVYH.VKYEDYPENGVVQLRGKDVRPRArtv
  61 37rlTTDSSTDR..VSYH.IRYEDYPENGVVEMSVSDVRPRArtl
  62 ....-------D..VIYH.IEYDEYPESGTVEINVKDLRPRArtn
  63 ....-------D..VIYH.IEYDEYPESGTVEINVKDLRPRArtn
  64 30nsDSVAADED..VIYH.IEYDE------------------...
  65 30nsDSVAADED..VIYH.IEYDE------------------...
  66 ....------ES..VLYH.VKYDGYEEDEINKLPGRDIRPRArkr
  67 ....----KTDG..LDYH.IKFDDYGDDGVKVVGEKLIRPRArkl
  68 ....SSYKRTNG..NVNHnSK---------------------...
  69 ....SSCKRTNG..NKA-.-----------------------...