Best Alignments for T0514

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1x3cA	8.0389e+00	1x3cA/T0514-1x3cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1
1ikpA	1.2824e+01	1ikpA/T0514-1ikpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.29.1.7 d.166.1.1 f.1.5.1
3cbnA	2.0965e+01	3cbnA/T0514-3cbnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hqhE	2.3391e+01	2hqhE/T0514-2hqhE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oo4A	2.4137e+01	2oo4A/T0514-2oo4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1i6pA	2.5803e+01	1i6pA/T0514-1i6pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.53.2.1
2atjA	2.5971e+01	2atjA/T0514-2atjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.93.1.1
1uhvA	2.6247e+01	1uhvA/T0514-1uhvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.71.1.2 c.1.8.3
1h8uA	2.6465e+01	1h8uA/T0514-1h8uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e3bA	2.6723e+01	2e3bA/T0514-2e3bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qgjA	2.7713e+01	1qgjA/T0514-1qgjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.93.1.1
2boqA	3.0931e+01	2boqA/T0514-2boqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1arv	3.3625e+01	1arv/T0514-1arv-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z53A	3.3662e+01	1z53A/T0514-1z53A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pa2A	3.3944e+01	1pa2A/T0514-1pa2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1schA	3.5121e+01	1schA/T0514-1schA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.93.1.1
1lycA	3.5605e+01	1lycA/T0514-1lycA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
7atjA	3.6778e+01	7atjA/T0514-7atjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.93.1.1
2aukA	3.8398e+01	2aukA/T0514-2aukA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1fvuA	3.8646e+01	1fvuA/T0514-1fvuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001