Best Alignments for T0514

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3cbnA	7.8136e+00	3cbnA/T0514-3cbnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ro0A	1.3507e+01	1ro0A/T0514-1ro0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.264.1.2
1x6oA	1.7040e+01	1x6oA/T0514-1x6oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.5.2 b.40.4.5
1iirA	1.7370e+01	1iirA/T0514-1iirA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.87.1.5
2g0bA	2.2814e+01	2g0bA/T0514-2g0bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x3cA	2.7207e+01	1x3cA/T0514-1x3cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.37.1.1
1eejA	2.9314e+01	1eejA/T0514-1eejA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.9 d.17.3.1
1ro2A	2.9623e+01	1ro2A/T0514-1ro2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.264.1.2
1zh8A	3.1188e+01	1zh8A/T0514-1zh8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ad2A	3.5060e+01	1ad2A/T0514-1ad2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.24.1.1
2d1zA	3.6381e+01	2d1zA/T0514-2d1zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ne9A	3.8480e+01	1ne9A/T0514-1ne9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.4 d.108.1.4
1e5rA	4.0358e+01	1e5rA/T0514-1e5rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vpvA	4.0962e+01	1vpvA/T0514-1vpvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.119.1.1
2fr2A	4.1927e+01	2fr2A/T0514-2fr2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.60.1.8
1khiA	4.4596e+01	1khiA/T0514-1khiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.5.2 b.40.4.5
2qe6A	4.4770e+01	2qe6A/T0514-2qe6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pz4A	4.5313e+01	2pz4A/T0514-2pz4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ceaA	4.8103e+01	3ceaA/T0514-3ceaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ifrA	5.2140e+01	1ifrA/T0514-1ifrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001