Best Alignments for T0514

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3cbnA/T0514-3cbnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cbnA/T0514-3cbnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7765e-015.98e-13
1x6oA/T0514-1x6oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x6oA/T0514-1x6oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9201e+001.01e-14 b.34.5.2
b.40.4.5
2ny1B/T0514-2ny1B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ny1B/T0514-2ny1B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0915e+011.84e-04 b.1.1.1
b.1.1.3
1tmxA/T0514-1tmxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tmxA/T0514-1tmxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5443e+012.91e-09
3bm4A/T0514-3bm4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bm4A/T0514-3bm4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5682e+011.79e-13
2dscA/T0514-2dscA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dscA/T0514-2dscA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7593e+013.17e-12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001