Best Alignments for T0514

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3cbnA/T0514-3cbnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cbnA/T0514-3cbnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1571e-011.90e-11
2ny1B/T0514-2ny1B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ny1B/T0514-2ny1B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2063e+001.84e-04 b.1.1.1
b.1.1.3
3bm4A/T0514-3bm4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bm4A/T0514-3bm4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9882e+012.37e-08
2dscA/T0514-2dscA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dscA/T0514-2dscA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2290e+012.15e-06
3cnqP/T0514-3cnqP-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cnqP/T0514-3cnqP-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4945e+011.16e-05

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001