Best Alignments for T0514

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3cbnA/T0514-3cbnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cbnA/T0514-3cbnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5699e-015.98e-13
1x6oA/T0514-1x6oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x6oA/T0514-1x6oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5642e+001.01e-14 b.34.5.2
b.40.4.5
2atjA/T0514-2atjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2atjA/T0514-2atjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3900e+001.30e+03 1bgp a.93.1.1
1tmxA/T0514-1tmxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tmxA/T0514-1tmxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4227e+002.91e-09
1dmhA/T0514-1dmhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dmhA/T0514-1dmhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2857e+017.09e-10 1dmhA b.3.6.1
3bm4A/T0514-3bm4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bm4A/T0514-3bm4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3327e+011.79e-13
2dscA/T0514-2dscA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2dscA/T0514-2dscA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4958e+013.17e-12
2ifsA/T0514-2ifsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ifsA/T0514-2ifsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7021e+013.57e-05
2hzqA/T0514-2hzqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hzqA/T0514-2hzqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7475e+012.64e-09
2jzaA/T0514-2jzaA-t04-global-adpstyle1.a2m 2jzaA/T0514-2jzaA-t04-global-adpstyle1.al 1.8553e+013.92e-04

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001