PFRMAT SS
TARGET T0513
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0513.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 146
METHOD
MODEL 1
M C 0.998
S C 0.745
F C 0.389
L H 0.392
K H 0.510
H H 0.697
V H 0.775
Q H 0.842
D H 0.818
C H 0.722
N H 0.466
T T 0.356
H C 0.465
D C 0.558
L G 0.340
S G 0.389
N G 0.241
F C 0.371
V E 0.522
R E 0.728
F E 0.802
V E 0.751
I E 0.545
E T 0.743
G T 0.688
R C 0.433
R E 0.623
V E 0.843
G E 0.765
W E 0.784
V E 0.609
R C 0.750
K H 0.885
A H 0.901
L H 0.914
A H 0.943
Q H 0.865
R H 0.803
L H 0.740
K H 0.547
A H 0.379
H C 0.494
G T 0.382
R T 0.343
V C 0.300
F E 0.465
D E 0.525
V E 0.375
T C 0.536
R T 0.339
D T 0.242
A E 0.575
V E 0.790
L E 0.784
L E 0.677
S C 0.420
A C 0.421
S C 0.448
L C 0.339
R S 0.383
T C 0.576
P H 0.436
Q H 0.510
S H 0.571
R H 0.708
T H 0.789
R H 0.966
A H 0.977
V H 0.992
A H 0.996
D H 0.996
V H 0.997
V H 0.995
D H 0.990
R H 0.985
L H 0.979
A H 0.948
D H 0.817
E T 0.728
G T 0.843
V C 0.756
V C 0.696
P C 0.395
A T 0.276
P C 0.377
R C 0.310
G C 0.250
E C 0.324
L C 0.453
Y C 0.401
R E 0.463
V E 0.558
N E 0.590
Q C 0.498
S C 0.512
W T 0.604
G S 0.457
E S 0.495
P C 0.547
T E 0.534
L E 0.827
M E 0.872
L E 0.899
L E 0.866
D E 0.695
R E 0.428
A H 0.497
V H 0.526
V H 0.464
P H 0.417
T H 0.361
F T 0.454
G T 0.344
V E 0.422
R E 0.637
A E 0.578
Y E 0.591
G E 0.779
V E 0.902
H E 0.962
L E 0.964
N E 0.962
G E 0.934
Y E 0.939
V E 0.909
G E 0.617
A T 0.355
G T 0.789
A T 0.592
D C 0.330
L E 0.658
H E 0.932
L E 0.969
W E 0.969
I E 0.947
G E 0.859
R E 0.729
R E 0.570
S C 0.575
P S 0.363
D S 0.319
K S 0.409
S C 0.583
V C 0.529
A C 0.644
P T 0.709
G T 0.737
K C 0.295
L C 0.344
D H 0.345
N H 0.369
M H 0.398
V T 0.377
A T 0.510
G T 0.484
G C 0.385
Q C 0.497
P C 0.546
A T 0.444
D T 0.467
L S 0.554
S C 0.694
L H 0.890
R H 0.962
Q H 0.984
N H 0.991
L H 0.990
I H 0.990
K H 0.988
E H 0.981
C H 0.970
A H 0.926
E H 0.849
E H 0.687
A H 0.406
D T 0.439
L C 0.507
P C 0.902
E H 0.841
A H 0.863
L H 0.876
A H 0.906
R H 0.730
Q H 0.572
A H 0.360
I C 0.479
P C 0.353
V C 0.341
G E 0.355
A E 0.707
I E 0.885
T E 0.893
Y E 0.815
C E 0.712
M E 0.577
E E 0.382
S C 0.533
P T 0.324
A T 0.489
G T 0.327
I C 0.495
K C 0.641
P C 0.414
D E 0.477
T E 0.882
L E 0.965
F E 0.987
L E 0.970
Y E 0.897
D E 0.801
L E 0.644
A E 0.610
L C 0.550
P C 0.853
E T 0.769
D T 0.776
F C 0.814
R C 0.659
P C 0.673
H C 0.780
N C 0.598
T C 0.445
D S 0.386
G T 0.334
E C 0.287
M C 0.331
A C 0.233
D E 0.237
F E 0.339
M E 0.607
L E 0.699
W E 0.429
P C 0.784
A H 0.973
A H 0.970
K H 0.979
V H 0.991
V H 0.983
E H 0.972
A H 0.957
V H 0.896
R H 0.794
T H 0.620
T T 0.467
E T 0.368
A C 0.489
F C 0.634
K C 0.786
F C 0.292
N T 0.253
V H 0.598
N H 0.922
L H 0.968
T H 0.978
V H 0.992
I H 0.994
D H 0.995
F H 0.991
A H 0.984
I H 0.964
R H 0.840
H T 0.590
G T 0.648
L C 0.645
I C 0.585
D C 0.846
P T 0.599
D T 0.713
N S 0.378
E C 0.491
P T 0.384
D H 0.473
Y H 0.925
Q H 0.976
E H 0.984
I H 0.985
L H 0.976
A H 0.931
G H 0.787
L H 0.564
R H 0.270
G T 0.306
R T 0.382
P C 0.509
R C 0.698
E C 0.631
R C 0.803
A C 0.732
A C 0.571
S C 0.630
P C 0.891
A C 0.999
END