PFRMAT SS
TARGET T0509
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0509.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 69
METHOD
MODEL 1
M C 0.983
S C 0.684
N C 0.467
A C 0.339
F H 0.546
E H 0.769
Y H 0.884
L H 0.960
R H 0.974
T H 0.977
Y H 0.969
V H 0.939
E H 0.782
S H 0.550
T C 0.287
T C 0.463
E C 0.588
T C 0.521
D C 0.591
A H 0.916
A H 0.952
V H 0.971
A H 0.985
R H 0.986
A H 0.986
R H 0.988
E H 0.978
D H 0.956
A H 0.924
A H 0.821
E H 0.673
F H 0.445
G T 0.350
L C 0.359
P C 0.333
A C 0.343
P C 0.268
D G 0.212
E C 0.279
M C 0.406
T C 0.791
G H 0.825
Q H 0.901
L H 0.959
L H 0.979
T H 0.985
T H 0.994
L H 0.996
A H 0.997
A H 0.997
T H 0.997
T H 0.995
N H 0.977
G H 0.865
N T 0.556
G T 0.572
S C 0.647
T C 0.444
G E 0.339
A E 0.854
I E 0.949
A E 0.953
I E 0.816
T E 0.575
P C 0.366
A T 0.343
A T 0.582
G T 0.415
L H 0.846
V H 0.897
G H 0.967
L H 0.975
Y H 0.971
I H 0.927
L H 0.774
N T 0.404
G T 0.485
L C 0.550
A C 0.769
D T 0.700
N T 0.743
T E 0.609
T E 0.905
L E 0.980
T E 0.973
C E 0.887
I E 0.642
D C 0.663
P C 0.597
E S 0.377
S H 0.771
E H 0.887
H H 0.938
Q H 0.983
R H 0.990
Q H 0.991
A H 0.994
K H 0.997
A H 0.997
L H 0.996
F H 0.994
R H 0.980
E H 0.934
A H 0.587
G T 0.782
Y C 0.786
S C 0.673
P C 0.284
S C 0.235
R E 0.520
V E 0.703
R E 0.745
F E 0.700
L E 0.404
L C 0.550
S C 0.286
R C 0.280
P H 0.584
L H 0.645
D H 0.609
V H 0.687
M H 0.734
S H 0.643
R H 0.661
L H 0.617
A H 0.525
N T 0.610
D T 0.400
S C 0.700
Y C 0.656
Q E 0.618
L E 0.987
V E 0.998
F E 0.997
G E 0.979
Q E 0.684
V C 0.498
S C 0.601
P T 0.302
M T 0.427
D T 0.344
L H 0.517
K H 0.970
A H 0.977
L H 0.981
V H 0.989
D H 0.976
A H 0.952
A H 0.950
W H 0.882
P H 0.756
L H 0.472
L H 0.358
R C 0.599
R T 0.727
G T 0.824
G E 0.538
A E 0.831
L E 0.941
V E 0.885
L E 0.802
A E 0.575
D E 0.229
A T 0.222
L T 0.246
L T 0.366
D T 0.619
G S 0.332
T C 0.468
I C 0.421
A C 0.428
D C 0.501
Q G 0.546
T G 0.527
R G 0.513
K S 0.471
D C 0.691
R H 0.669
D H 0.807
T H 0.941
Q H 0.971
A H 0.975
A H 0.986
R H 0.984
D H 0.983
A H 0.979
D H 0.983
E H 0.981
Y H 0.971
I H 0.950
R H 0.844
S H 0.551
I C 0.499
E T 0.439
G T 0.410
A C 0.455
H E 0.645
V E 0.891
A E 0.890
R E 0.905
L E 0.809
P E 0.582
L E 0.369
G C 0.270
A S 0.311
G S 0.247
L E 0.511
T E 0.687
V E 0.782
V E 0.809
T E 0.733
K E 0.476
A C 0.998
END