Best Alignments for T0507

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1cozA/T0507-1cozA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cozA/T0507-1cozA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8606e-166.29e-47 1cozA c.26.1.2
1qjcA/T0507-1qjcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qjcA/T0507-1qjcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0066e-151.82e-45 1b6tA c.26.1.3
1yumA/T0507-1yumA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yumA/T0507-1yumA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9440e-112.43e-31
2h29A/T0507-2h29A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h29A/T0507-2h29A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0421e-093.48e-30
1lw7A/T0507-1lw7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lw7A/T0507-1lw7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1715e-083.22e-31 c.26.1.3
c.37.1.1
1mrzA/T0507-1mrzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mrzA/T0507-1mrzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6267e-074.45e-26 b.43.5.1
c.26.1.3
2b7lA/T0507-2b7lA-t2k-global-adpstyle1.a2m 2b7lA/T0507-2b7lA-t2k-global-adpstyle1.al 1.1877e-061.44e-36
2qjtA/T0507-2qjtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qjtA/T0507-2qjtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2875e-063.07e-25
2qjoA/T0507-2qjoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qjoA/T0507-2qjoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9896e-061.98e-21
1v8fA/T0507-1v8fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v8fA/T0507-1v8fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0216e-041.31e-31 c.26.1.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001