Best Alignments for T0506

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2arzA/T0506-2arzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2arzA/T0506-2arzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9139e-344.57e-129 b.45.1.1
2iabA/T0506-2iabA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2iabA/T0506-2iabA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7121e-095.87e-50
2ig6A/T0506-2ig6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ig6A/T0506-2ig6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7162e-082.68e-39
2hhzA/T0506-2hhzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hhzA/T0506-2hhzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1969e-088.93e-41
2re7A/T0506-2re7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2re7A/T0506-2re7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7779e-081.40e-44
2i51A/T0506-2i51A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2i51A/T0506-2i51A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5471e-068.82e-42
2htdA/T0506-2htdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2htdA/T0506-2htdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9563e-065.40e-38
2qeaA/T0506-2qeaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qeaA/T0506-2qeaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4125e-052.61e-37
2ou5A/T0506-2ou5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ou5A/T0506-2ou5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2915e-041.42e-29
3cp3A/T0506-3cp3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3cp3A/T0506-3cp3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4255e-044.21e-31

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001