Best Alignments for T0506

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2arzA/T0506-2arzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2arzA/T0506-2arzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1782e-374.57e-129 b.45.1.1
2ig6A/T0506-2ig6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ig6A/T0506-2ig6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2890e-041.48e-20
2iabA/T0506-2iabA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2iabA/T0506-2iabA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4658e-043.50e-24
2hhzA/T0506-2hhzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hhzA/T0506-2hhzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3367e-048.78e-15
2htdA/T0506-2htdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2htdA/T0506-2htdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0391e-032.62e-20
2re7A/T0506-2re7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2re7A/T0506-2re7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1976e-031.51e-18

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001