Best Alignments for T0503

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1g6nA/T0503-1g6nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g6nA/T0503-1g6nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4501e-213.08e-105 2cgpA a.4.5.4
b.82.3.2
2fmyA/T0503-2fmyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fmyA/T0503-2fmyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7593e-158.38e-70
2pqqA/T0503-2pqqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pqqA/T0503-2pqqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5954e-145.78e-69
2h6bA/T0503-2h6bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h6bA/T0503-2h6bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6317e-132.96e-67
2z69A/T0503-2z69A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2z69A/T0503-2z69A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1256e-131.11e-64
2zcwA/T0503-2zcwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2zcwA/T0503-2zcwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0705e-122.31e-64
1ft9A/T0503-1ft9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ft9A/T0503-1ft9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7541e-126.40e-64 1ft9A a.4.5.4
b.82.3.1
1o5lA/T0503-1o5lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o5lA/T0503-1o5lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8056e-123.68e-72 b.82.3.2
3bpzA/T0503-3bpzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bpzA/T0503-3bpzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8349e-113.09e-58
1cx4A/T0503-1cx4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cx4A/T0503-1cx4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2480e-109.46e-61 b.82.3.2
b.82.3.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001