Best Alignments for T0503

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1i6xA/T0503-1i6xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i6xA/T0503-1i6xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0393e-249.33e-102 a.4.5.4
b.82.3.2
2fmyA/T0503-2fmyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fmyA/T0503-2fmyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5114e-203.35e-74
2pqqA/T0503-2pqqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pqqA/T0503-2pqqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3338e-197.25e-75
2h6bA/T0503-2h6bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h6bA/T0503-2h6bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8325e-183.72e-70
2zcwA/T0503-2zcwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2zcwA/T0503-2zcwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8433e-172.64e-65
1vp6A/T0503-1vp6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vp6A/T0503-1vp6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9245e-166.53e-70 b.82.3.2
2z69A/T0503-2z69A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2z69A/T0503-2z69A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7434e-152.04e-63
1ft9A/T0503-1ft9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ft9A/T0503-1ft9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4800e-153.46e-73 1ft9A a.4.5.4
b.82.3.1
1cx4A/T0503-1cx4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cx4A/T0503-1cx4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1662e-144.24e-70 b.82.3.2
b.82.3.2
3bpzA/T0503-3bpzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bpzA/T0503-3bpzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2219e-144.24e-66

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001