Best Alignments for T0501

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1k20A	5.0862e-29	1k20A/T0501-1k20A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.107.1.1
1ir6A	5.5202e-28	1ir6A/T0501-1ir6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.107.1.2
2eb0A	1.8403e-27	2eb0A/T0501-2eb0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qb7A	5.0013e-25	2qb7A/T0501-2qb7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1i74A	6.2917e-24	1i74A/T0501-1i74A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.107.1.1
1wpnA	2.5241e-16	1wpnA/T0501-1wpnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.107.1.1
1jeoA	1.0227e+00	1jeoA/T0501-1jeoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.80.1.3
8abp	2.1054e+00	8abp/T0501-8abp-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vimA	2.2742e+00	1vimA/T0501-1vimA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.80.1.3
1f6dA	2.3386e+00	1f6dA/T0501-1f6dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.87.1.3
2rgyA	2.6705e+00	2rgyA/T0501-2rgyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gudA	2.8248e+00	1gudA/T0501-1gudA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
2fepA	3.1312e+00	2fepA/T0501-2fepA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
8abpA	3.1544e+00	8abpA/T0501-8abpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1tlfA	3.2581e+00	1tlfA/T0501-1tlfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
1m3sA	3.5172e+00	1m3sA/T0501-1m3sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.80.1.3
1v4vA	3.6644e+00	1v4vA/T0501-1v4vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.87.1.3
1jftA	3.8578e+00	1jftA/T0501-1jftA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.5 c.93.1.1
2fn9A	3.9211e+00	2fn9A/T0501-2fn9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dri	3.9694e+00	2dri/T0501-2dri-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001