Best Alignments for T0498

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2qmtA/T0498-2qmtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qmtA/T0498-2qmtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0619e-151.38e-33
2igdA/T0498-2igdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2igdA/T0498-2igdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2789e-151.45e-34 d.15.7.1
2gi9A/T0498-2gi9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gi9A/T0498-2gi9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9121e-144.85e-34
2on8A/T0498-2on8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2on8A/T0498-2on8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2634e-133.90e-30
2j52A/T0498-2j52A-t2k-global-adpstyle1.a2m 2j52A/T0498-2j52A-t2k-global-adpstyle1.al 1.7970e-045.11e-25
2rmmA/T0498-2rmmA-t2k-global-adpstyle1.a2m 2rmmA/T0498-2rmmA-t2k-global-adpstyle1.al 1.9757e-045.11e-25
2i38A/T0498-2i38A-t2k-global-adpstyle1.a2m 2i38A/T0498-2i38A-t2k-global-adpstyle1.al 2.1931e-045.11e-25
2i2yA/T0498-2i2yA-t2k-global-adpstyle1.a2m 2i2yA/T0498-2i2yA-t2k-global-adpstyle1.al 2.1993e-045.11e-25
2cwbA/T0498-2cwbA-t2k-global-adpstyle1.a2m 2cwbA/T0498-2cwbA-t2k-global-adpstyle1.al 3.0995e-042.57e-24
2onqA/T0498-2onqA-t2k-global-adpstyle1.a2m 2onqA/T0498-2onqA-t2k-global-adpstyle1.al 5.8580e-045.11e-25

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001