# TARGET T0498 # Using neural net t2k-5651-IDaaHr-5-15-7-15-9-15-13-ebghtl-seeded.net # This is a 4-layer network, with # window units # 5 15 # 7 15 # 9 15 # 13 6 (1 EBGHTL ) # The input amino acid frequencies were determined from # alignment T0498.t2k-thin90.a2m.gz # with weighted counts, using HenikoffWeight(-1 bits/column, 1) # Counts were regularized to probabilities using # /projects/compbio/lib/recode3.20comp # Total sequence weight for alignment was 14 # Pos AA E B G H T C 10N 1S 5N 5N 5N 5N 5N 5N 1 T 0.102 0.002 0.001 0.002 0.115 0.778 2 T 0.637 0.017 0.001 0.003 0.035 0.307 3 Y 0.895 0.004 0.001 0.001 0.012 0.087 4 K 0.958 0.001 0.001 0.001 0.006 0.033 5 L 0.981 0.001 0.001 0.001 0.003 0.013 6 I 0.980 0.001 0.001 0.001 0.006 0.012 7 L 0.954 0.002 0.001 0.001 0.015 0.028 8 N 0.826 0.004 0.003 0.002 0.075 0.090 9 L 0.358 0.009 0.050 0.010 0.420 0.153 10 K 0.218 0.007 0.070 0.012 0.534 0.159 11 Q 0.240 0.027 0.073 0.016 0.503 0.142 12 A 0.310 0.026 0.032 0.021 0.425 0.186 13 K 0.377 0.017 0.018 0.060 0.313 0.216 14 E 0.412 0.010 0.018 0.180 0.224 0.156 15 E 0.428 0.008 0.005 0.270 0.112 0.176 16 A 0.378 0.015 0.004 0.405 0.044 0.155 17 I 0.320 0.007 0.008 0.477 0.030 0.157 18 K 0.235 0.006 0.029 0.602 0.031 0.097 19 E 0.070 0.001 0.064 0.826 0.017 0.021 20 L 0.075 0.003 0.072 0.801 0.030 0.019 21 V 0.121 0.011 0.050 0.715 0.062 0.041 22 D 0.062 0.007 0.026 0.568 0.148 0.190 23 A 0.001 0.001 0.009 0.971 0.015 0.005 24 G 0.001 0.001 0.008 0.973 0.016 0.003 25 T 0.001 0.001 0.006 0.986 0.007 0.001 26 A 0.001 0.001 0.004 0.987 0.006 0.002 27 E 0.001 0.001 0.002 0.988 0.006 0.004 28 K 0.001 0.001 0.002 0.976 0.012 0.009 29 Y 0.001 0.001 0.004 0.983 0.007 0.006 30 I 0.001 0.001 0.006 0.979 0.010 0.005 31 K 0.001 0.001 0.008 0.979 0.009 0.003 32 L 0.001 0.001 0.004 0.979 0.011 0.006 33 I 0.001 0.001 0.004 0.977 0.010 0.008 34 A 0.002 0.003 0.005 0.969 0.014 0.009 35 N 0.003 0.003 0.011 0.915 0.059 0.009 36 A 0.007 0.001 0.014 0.804 0.144 0.029 37 K 0.006 0.002 0.035 0.542 0.301 0.114 38 T 0.015 0.007 0.002 0.009 0.296 0.671 39 V 0.052 0.016 0.002 0.002 0.203 0.725 40 E 0.210 0.019 0.004 0.001 0.270 0.496 41 G 0.475 0.017 0.008 0.002 0.295 0.202 42 V 0.751 0.020 0.005 0.002 0.114 0.108 43 W 0.841 0.017 0.003 0.002 0.042 0.095 44 T 0.872 0.016 0.003 0.002 0.040 0.066 45 L 0.693 0.019 0.019 0.010 0.110 0.149 46 K 0.258 0.031 0.110 0.024 0.394 0.183 47 D 0.081 0.020 0.147 0.023 0.678 0.052 48 E 0.062 0.014 0.116 0.034 0.704 0.070 49 I 0.058 0.031 0.019 0.015 0.837 0.040 50 K 0.104 0.016 0.014 0.016 0.786 0.064 51 T 0.162 0.020 0.014 0.022 0.568 0.214 52 F 0.413 0.028 0.012 0.020 0.347 0.179 53 T 0.410 0.075 0.009 0.021 0.150 0.334 54 V 0.253 0.030 0.008 0.021 0.132 0.557 55 T 0.059 0.015 0.005 0.015 0.100 0.806 56 E 0.002 0.003 0.002 0.005 0.036 0.951