Best Alignments for T0498

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1mhxA	4.8610e-14	1mhxA/T0498-1mhxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.7.1
2gi9A	1.5934e-13	2gi9A/T0498-2gi9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qmtA	1.6042e-13	2qmtA/T0498-2qmtA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2on8A	3.2107e-13	2on8A/T0498-2on8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mi0A	4.3332e-13	1mi0A/T0498-1mi0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.7.1
2igdA	5.7526e-13	2igdA/T0498-2igdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.7.1
2igd	6.7632e-13	2igd/T0498-2igd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pgx	1.0119e-12	1pgx/T0498-1pgx-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b7eA	2.8950e+00	2b7eA/T0498-2b7eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1uzcA	3.2404e+01	1uzcA/T0498-1uzcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.159.2.1
1eeuA	4.5228e+01	1eeuA/T0498-1eeuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
2qsbA	4.6026e+01	2qsbA/T0498-2qsbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bwwA	4.8212e+01	1bwwA/T0498-1bwwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
2qzgA	5.0253e+01	2qzgA/T0498-2qzgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1eeqA	5.1659e+01	1eeqA/T0498-1eeqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
1qfwM	6.1527e+01	1qfwM/T0498-1qfwM-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
1i8kA	6.2792e+01	1i8kA/T0498-1i8kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
2i7hA	6.6261e+01	2i7hA/T0498-2i7hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a7nL	6.9364e+01	1a7nL/T0498-1a7nL-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.1.1
2joeA	7.1756e+01	2joeA/T0498-2joeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001