# List of top-scoring protein chains for T0498.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2igdA	61	3.45e-08	d.15.7.1	37821
1pgbA	56	3.45e-08	d.15.7.1	37824
2ighA	61	3.45e-08	d.15.7.1	37832
1pgxA	83	3.69e-08	d.15.7.1	37823
1fccC	56	3.77e-08	d.15.7.1	37829
2iggA	64	3.82e-08	d.15.7.1	37831
2nmqA	55	4.05e-08	d.15.7.1	138377
1uwxA	63	4.51e-08	d.15.7.1	119765
1qkzA	64	4.52e-08	d.15.7.1	37826
1p7eA	56	4.74e-08	d.15.7.1	94221
2j52A	56	4.94e-08		
2qmtA	56	5.02e-08		
1ibxB	145	5.31e-08	d.15.2.1	62232
1pn5A	159	5.76e-08	a.77.1.5	94948
2rmmA	56	5.80e-08		
2plpA	54	7.61e-08	d.15.7.1	139740
1fd6A	57	8.11e-08	d.15.7.1	59769
2i38A	150	8.42e-08		
2i2yA	150	8.53e-08		
1em7A	56	1.25e-07	d.15.7.1	70131
2cwbA	108	1.50e-07		
1q10A	56	1.70e-07	d.15.7.1	95526
1fclA	56	2.06e-07	d.15.7.1	59768
1mi0A	65	2.67e-07	d.15.7.1	79135
1mvkA	56	3.17e-07	d.15.7.1	79501
1gb4A	57	3.78e-07	d.15.7.1	37833
2onqA	56	4.02e-07		
2on8A	56	5.18e-07		
1zxhA	56	6.11e-07		
1mhxA	65	1.58e-06	d.15.7.1	79134
1le3A	16	3.049	k.29.1.1	73861
1zxgA	59	20.73		
2b7eA	59	61.79		
1qydA	313	64.79	c.2.1.2	96583
1olpA	370	70.84	a.124.1.1,b.12.1.3	93320,93321
1c0eA	157	79.90	c.44.1.1	32638
2fs1A	56	83.19