# List of top-scoring protein chains for t2k-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2on8A	56	5.39e-11		
1mhxA	65	5.51e-11	d.15.7.1	79134
2gi9A	56	5.67e-11		
2qmtA	56	5.67e-11		
2igd	61	6.08e-11		
1pgx	83	6.31e-11		
1mi0A	65	6.67e-11	d.15.7.1	79135
2igdA	61	6.83e-11	d.15.7.1	37821
2b7eA	59	5.380		
2qsbA	89	23.02		
2qzgA	94	23.77		
1bwwA	109	31.97	b.1.1.1	20518
1xg0A	76	33.01	d.184.1.1	115273
1eeuA	114	33.03	b.1.1.1	20546
1uzcA	71	33.37	a.159.2.1	100222
1qfwM	108	34.29	b.1.1.1	20436
2i7hA	189	38.12		
1eeqA	114	39.21	b.1.1.1	20544
3cjsA	60	39.82		
1b2iA	83	41.69	g.14.1.1	44640
1i8kA	107	41.70	b.1.1.1	71130
2f15A	96	42.22		
1a7nL	107	42.98	b.1.1.1	19940
1ql3A	99	47.40	a.3.1.1	15822
1cd8	114	49.63		
1h8gA	95	50.05	b.109.1.1	65735
1nijA	318	53.25	c.37.1.10,d.237.1.1	85741,85742
1j1xL	107	53.82	b.1.1.1	77064
1i71A	83	55.74	g.14.1.1	61864
1a2yA	107	63.40	b.1.1.1	19926
1g7jA	107	64.02	b.1.1.1	19932
2jh1A	246	64.39		
2cruA	118	67.94	a.5.6.1	130742
1krnA	88	71.09	g.14.1.1	44629
2hz5A	106	73.77		
2f6eA	127	74.14		
1vmiA	355	77.10	c.77.1.5	113678
3bm1A	183	78.21		
2qklA	127	78.67		
2jt1A	77	79.85		
1z0nA	96	81.25		
1mqkL	120	81.43	b.1.1.1	85054
1tr0A	108	86.54	d.58.4.4	107261
1co6A	107	86.83	a.3.1.1	15894
1dlfL	113	86.89	b.1.1.1	20382
2id3A	225	89.70	a.4.1.9,a.121.1.1	137261,137262